Additional Information

Field	Value
Data last updated	August 4, 2016
Metadata last updated	November 25, 2024
Created	August 4, 2016
Format	FASTQ
License	CC-BY-4.0-AU
File size	4.8G
Filename	13684_AD04H2ACXX_ACTTGA_L005_R2.fastq.gz
Flowcell	D04H2ACXX
Index number	8
Lane number	5
Md5	e949351fd8a07b50e4ed0784a4736823
Note	{ "row": 7, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13684", "official_variety": "CS7071", "kingdom": "Fungi", "phylum": "Ascomycota", "species": "Fusarium culmorum", "sample_id": "CS7071", "other_id": "", "original_source_host_species": "crown tissue", "collection_date": 2009.0, "collection_location": "Western Australia", "wheat_pathogenicity": "High in crown rot assay", "contact_scientist": "Donald Gardiner", "sample_dna_source": "Whole organism from in vitro culture", "dna_extraction_protocol": "QIAgen", "library": "PE", "library_construction": 494.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "3621_2", "library_id": "CS7071", "index_number": null, "index_sequence": "ACTTGA", "run_number": 97.0, "flow_cell_id": "D04H2ACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13684_AD04H2ACXX_ACTTGA_L005_R2.fastq.gz", "sequence_filetype": null, "md5_checksum": "e949351fd8a07b50e4ed0784a4736823", "file_size": "4.8G", "analysis_performed": "Assembled and annotated", "genbank_project": "PRJEB1738", "locus_tag": "BN852", "genome_analysis": "CS7071_wgs*", "metdata_file": "CS7071-metadata.txt" }
On same domain	True
Package id	102.100.100.13684
Resource type	wheat-pathogens
Run index number	8
Run lane number	5
Run number	97
Run protocol	Illumina TruSeq DNA Sample Preparation
Run protocol base pairs	494
Run protocol library type	PE
S3etag 8388608	c9716afdd58ba332fc784602a9cbe7fb-613
Sequencer	Illumina HiSeq 2000
Sha256	4fd56cdaeb36f86e0ceb3fcb1033b2a94975b9d6d1515ccab54a13b31366f944
Size	4.7 GiB
State	active
Url type	upload
MD5	e949351fd8a07b50e4ed0784a4736823
SHA256	4fd56cdaeb36f86e0ceb3fcb1033b2a94975b9d6d1515ccab54a13b31366f944
File size (bytes)	5134527652
S3 E-Tag (8MB multipart)	c9716afdd58ba332fc784602a9cbe7fb-613
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size	4.8G
flowcell	D04H2ACXX
index_number	8.0
lane_number	5.0
resource_path
resource_type	wheat-pathogens
run_index_number	8.0
run_lane_number	5.0
run_number	97.0
run_protocol	Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs	494.0
run_protocol_library_type	PE
sequencer	Illumina HiSeq 2000