Additional Information

Field	Value
Data last updated	August 4, 2016
Metadata last updated	November 25, 2024
Created	August 4, 2016
Format	FASTQ
License	CC-BY-4.0-AU
File size	5.2G
Filename	13684_AD04H2ACXX_ACTTGA_L005_R1.fastq.gz
Flowcell	D04H2ACXX
Index number	8
Lane number	5
Md5	c145b4a7cbc6b5bba04fb1d3d54247e7
Note	{ "row": 6, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13684", "official_variety": "CS7071", "kingdom": "Fungi", "phylum": "Ascomycota", "species": "Fusarium culmorum", "sample_id": "CS7071", "other_id": "", "original_source_host_species": "crown tissue", "collection_date": 2009.0, "collection_location": "Western Australia", "wheat_pathogenicity": "High in crown rot assay", "contact_scientist": "Donald Gardiner", "sample_dna_source": "Whole organism from in vitro culture", "dna_extraction_protocol": "QIAgen", "library": "PE", "library_construction": 494.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "3621_2", "library_id": "CS7071", "index_number": null, "index_sequence": "ACTTGA", "run_number": 97.0, "flow_cell_id": "D04H2ACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13684_AD04H2ACXX_ACTTGA_L005_R1.fastq.gz", "sequence_filetype": null, "md5_checksum": "c145b4a7cbc6b5bba04fb1d3d54247e7", "file_size": "5.2G", "analysis_performed": "Assembled and annotated", "genbank_project": "PRJEB1738", "locus_tag": "BN852", "genome_analysis": "CS7071_wgs*", "metdata_file": "CS7071-metadata.txt" }
On same domain	True
Package id	102.100.100.13684
Position	1
Resource type	wheat-pathogens
Run index number	8
Run lane number	5
Run number	97
Run protocol	Illumina TruSeq DNA Sample Preparation
Run protocol base pairs	494
Run protocol library type	PE
S3etag 8388608	fd8a1fad6c43dea93172111363f9c93b-660
Sequencer	Illumina HiSeq 2000
Sha256	d57af183cd31656ff28bf973d759bfaf3b4017b1c8052e997244f611484be9c1
Size	5.1 GiB
State	active
Url type	upload
MD5	c145b4a7cbc6b5bba04fb1d3d54247e7
SHA256	d57af183cd31656ff28bf973d759bfaf3b4017b1c8052e997244f611484be9c1
File size (bytes)	5530425940
S3 E-Tag (8MB multipart)	fd8a1fad6c43dea93172111363f9c93b-660
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size	5.2G
flowcell	D04H2ACXX
index_number	8.0
lane_number	5.0
resource_path
resource_type	wheat-pathogens
run_index_number	8.0
run_lane_number	5.0
run_number	97.0
run_protocol	Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs	494.0
run_protocol_library_type	PE
sequencer	Illumina HiSeq 2000