Additional Information

Field	Value
Data last updated	August 4, 2016
Metadata last updated	November 25, 2024
Created	August 4, 2016
Format	FASTQ
License	CC-BY-4.0-AU
File size	983M
Filename	13682_AC0B4AACXX_TAGCTT_L007_R1.fastq.gz
Flowcell	C0B4AACXX
Index number	10
Lane number	7
Md5	9904a521390f181f28ea7f9359ec38c7
Note	{ "row": 4, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13682", "official_variety": "CS5907", "kingdom": "Fungi", "phylum": "Ascomycota", "species": "Fusarium acuminatum", "sample_id": "CS5907", "other_id": "", "original_source_host_species": "Triticum aestivum, crown tissue", "collection_date": 39764.0, "collection_location": "Stockdale, WA", "wheat_pathogenicity": "Moderate in crown rot assay", "contact_scientist": "Donald Gardiner", "sample_dna_source": "Whole organism from in vitro culture", "dna_extraction_protocol": "QIAgen", "library": "PE", "library_construction": 463.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "3479_4", "library_id": "CS5907", "index_number": null, "index_sequence": "TAGCTT", "run_number": 173.0, "flow_cell_id": "C0B4AACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13682_AC0B4AACXX_TAGCTT_L007_R1.fastq.gz", "sequence_filetype": null, "md5_checksum": "9904a521390f181f28ea7f9359ec38c7", "file_size": "983M", "analysis_performed": "Assembled and annotated", "genbank_project": "PRJEB1737", "locus_tag": "BN851", "genome_analysis": "CS5907_wgs*", "metdata_file": "CS5907-metadata.txt" }
On same domain	True
Package id	102.100.100.13682
Resource type	wheat-pathogens
Run index number	10
Run lane number	7
Run number	173
Run protocol	Illumina TruSeq DNA Sample Preparation
Run protocol base pairs	463
Run protocol library type	PE
S3etag 8388608	647977199ebfae66b2132037d46b77bb-123
Sequencer	Illumina HiSeq 2000
Sha256	20e4764ed6757022ea4b19d58c9fceab23d82cfcfbac50f4a22a9c8e8b86105b
Size	982.6 MiB
State	active
Url type	upload
MD5	9904a521390f181f28ea7f9359ec38c7
SHA256	20e4764ed6757022ea4b19d58c9fceab23d82cfcfbac50f4a22a9c8e8b86105b
File size (bytes)	1030366596
S3 E-Tag (8MB multipart)	647977199ebfae66b2132037d46b77bb-123
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size	983M
flowcell	C0B4AACXX
index_number	10.0
lane_number	7.0
resource_path
resource_type	wheat-pathogens
run_index_number	10.0
run_lane_number	7.0
run_number	173.0
run_protocol	Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs	463.0
run_protocol_library_type	PE
sequencer	Illumina HiSeq 2000