Additional Information

Field	Value
Data last updated	August 4, 2016
Metadata last updated	November 25, 2024
Created	August 4, 2016
Format	FASTQ
License	CC-BY-4.0-AU
File size	11G
Filename	13681_D0W52ACXX_GCCAAT_L004_R2.fastq.gz
Flowcell	D0W52ACXX
Index number	6
Lane number	4
Md5	33b748544c40a2969738aa40b8af8c46
Note	{ "row": 3, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13681", "official_variety": "barley grass yellow rust-CHP", "kingdom": "Fungi", "phylum": "Basidiomycota", "species": "Puccinia striiformis f. sp. pseudo-hordei", "sample_id": "BGYR-CHP", "other_id": "", "original_source_host_species": "Hordeum leporinum", "collection_date": 40667.0, "collection_location": "Cook Horse Paddock, ACT", "wheat_pathogenicity": "not observed", "contact_scientist": "Will Jackson", "sample_dna_source": "Urediniospores", "dna_extraction_protocol": "QIAgen", "library": "PE", "library_construction": 491.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": 4214.0, "library_id": "BGYR-CHP", "index_number": null, "index_sequence": "GCCAAT", "run_number": 223.0, "flow_cell_id": "D0W52ACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13681_D0W52ACXX_GCCAAT_L004_R2.fastq.gz", "sequence_filetype": null, "md5_checksum": "33b748544c40a2969738aa40b8af8c46", "file_size": "11G", "analysis_performed": "In assembly", "genbank_project": "", "locus_tag": "", "genome_analysis": "", "metdata_file": "BGYR-CHP-metadata.txt" }
On same domain	True
Package id	102.100.100.13681
Resource type	wheat-pathogens
Run index number	6
Run lane number	4
Run number	223
Run protocol	Illumina TruSeq DNA Sample Preparation
Run protocol base pairs	491
Run protocol library type	PE
S3etag 8388608	af3f274747b61ead8c7461b3f81fb611-1422
Sequencer	Illumina HiSeq 2000
Sha256	20f70e11edaec22372590fda385df2fcfb24bd37ec80684c6eec7a268c20d98c
Size	11.1 GiB
State	active
Url type	upload
MD5	33b748544c40a2969738aa40b8af8c46
SHA256	20f70e11edaec22372590fda385df2fcfb24bd37ec80684c6eec7a268c20d98c
File size (bytes)	11926952643
S3 E-Tag (8MB multipart)	af3f274747b61ead8c7461b3f81fb611-1422
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size	11G
flowcell	D0W52ACXX
index_number	6.0
lane_number	4.0
resource_path
resource_type	wheat-pathogens
run_index_number	6.0
run_lane_number	4.0
run_number	223.0
run_protocol	Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs	491.0
run_protocol_library_type	PE
sequencer	Illumina HiSeq 2000