Genome Resequencing, Illumina FASTQ
Dataset size is: 13.76 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:date_of_transfer_to_archive:365:tsi-consortium-members |
| Access Control Date | 2022-04-15 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysis_software | NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/illumina-shortread/BPAOPS-1061/20210415_TSI_AGRF_H3GYVDSX2/ |
| ccg_jira_ticket | BPAOPS-1061 |
| data_context | Genome Resequencing |
| data_custodian | Kevin C. Rowe |
| data_type | Illumina FASTQ |
| dataset_id | 102.100.100/358736 |
| date_of_transfer | 2021-04-15 |
| date_of_transfer_to_archive | 2021-04-15 |
| description | NovaSeq 6000; IDT xGen Prism; Dataset ID 358736 |
| file_type | fastq.gz |
| flow_cell_id | H3GYVDSX2 |
| flowcell_id | H3GYVDSX2 |
| flowcell_type | S4-300 |
| folder_name | 20210415_TSI_AGRF_H3GYVDSX2 |
| genus | Mastacomys |
| insert_size_range | 350.0 |
| library_construction_protocol | IDT xGen Prism |
| library_id | 357603 |
| library_index_id | IDT8_i7_12 & IDT8_i5_12 |
| library_index_sequence | GCTATCCT-AACAGGTG |
| library_layout | PE |
| library_pcr_cycles | 10.0 |
| library_strategy | PE |
| library_type | DNA |
| n_libraries_pooled | 24.0 |
| sample_id | 102.100.100/355592 |
| sequencing_facility | AGRF |
| sequencing_model | 6000.0 |
| sequencing_platform | NovaSeq |
| species | fuscus |
| specimen_id | AA72086 |
| ticket | BPAOPS-1061 |
| tissue_number | AA72086_Ear |