Stemcell SmallRNA 102.100.100/29573
Dataset size is: 783.87 MiB
Data and Resources
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | illumina-shortread |
| analysis_software_version | 1.8.2 |
| analytical_platform | Small RNA |
| archive_ingestion_date | 2016-11-07 |
| bpa_dataset_id | 102.100.100/52051 |
| cell_type | C11 hiPSCs were genomed edited to knock in a fluorescent protein into the endogenous SOX10 locus. This line was differentiated to neural crest cells. SOX10 positive and negative cells were harvested for analysis |
| contextual_data_submission_date | 2016-09-21 |
| data_generated | 2016-11-07 |
| data_type | FastQ |
| dataset_url | https://downloads-qcif.bioplatforms.com/bpa/stemcell/raw/small_rna/agrf/BPAOPS-54/ |
| date_of_transfer | 2016-11-07 |
| description | Stem Cell Transcriptome |
| disease_state | WT |
| extract_protocol | Total RNA extracted using qiagen miRNeasy mini kit |
| facility | AGRF |
| folder_name | 20161107_AGRF_BPA_StemCells_CA7VCANXX |
| insert_size_range | 15-35bp |
| library_construction_protocol | TruSeq RNA library |
| omics | Transcriptomics |
| plate_number | 1 |
| replicate_group_id | 3.0 |
| research_group | Ernst Wolvetang |
| sample_description | Total RNA eluted in H22 |
| sample_id | 102.100.100/29573 |
| sample_name | 129_7 SOX10:mMaple positive |
| sample_submission_date | 2016-09-21 |
| sequencer | HiSeq 2500 |
| species | Homo sapiens |
| stem_cell_line | PSC - Neural crest |
| stem_cell_state | Pluripotent stem cell state |
| submitter | Anu Balachandran |
| ticket | BPAOPS-54 |
| total_samples | 8 |
| well_number | 3 |