Methods

Find the current Australian Microbiome Initiative methods on the initiative website: https://www.australianmicrobiome.com/protocols/

 

The information below is legacy information which does not reflect the current provided data. All relevant information is included through thelink above.

BASE Methods: Sample CollectionSoil chemistry methodsDNA ExtractionBioinformatic AnalysisMetagenomic Sequencing

Amplicon methods and information

AmpliconOTU TablesOTU Taxonomy; OTU Sequences; Sequencing and analysis methods

16SOTUTaxonomyFASTAMethod

A16SOTUTaxonomyFASTAMethod

ITSOTUTaxonomyFASTAMethod

18SOTUTaxonomyFASTAMethod

Marine Microbes Methods: 16S Amplicon sequencing SOPArchaeal 16S Amplicon sequencing SOP18S Amplicon sequencing SOPCoastal sampling SOPPelagic sampling SOPMetagenomics ProtocolMetatranscriptomics Protocol