Black-footed rock-wallaby, Conservation Genomics, ddRAD_AGRF, ear epithelium
Dataset size is: 31.47 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:365:omg-consortium-members |
| Access Control Date | 2022-03-23 |
| Access Control Mode | date |
| Sequence Data Type | illumina-ddrad |
| access_rights | location information restricted |
| ala_specimen_url | NA |
| archive_ingestion_date | 2021-03-23 |
| barcode_id | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/omg_staging/ddrad/BPAOPS-1051/AGRF_OMG_H3LFNDRXY_52651/ |
| birth_date | unknown |
| bpa_dataset_id | 102.100.100/52651 |
| bpa_work_order | 40072 |
| class | Mammalia |
| collection_method | soft-sided box trap |
| common_name | Black-footed rock-wallaby |
| coord_uncertainty_metres | NA |
| country | Australia |
| data_custodian | Kym Ottewell | DBCA |
| data_generated | 2021-03-23 |
| data_type | Illumina FASTQ |
| date_of_transfer | 2021-03-23 |
| ddrad_data | yes |
| ddrad_dataset_ids | 52651 |
| death_date | unknown |
| description | NovaSeq 6000 ddRAD Petrogale lateralis ddRAD data set ID 52651 |
| experimental_design | EcoRI and MseI |
| family | Macropodidae |
| flowcell_id | H3LFNDRXY |
| folder_name | AGRF_OMG_H3LFNDRXY_52651 |
| genus | Petrogale |
| habitat | unknown |
| library_location | AGRF Melbourne |
| library_pcr_cycles | 11.0 |
| library_pcr_reps | 7.0 |
| library_prep_date | 2021-02-01 |
| library_prep_method | ddRAD (based on Peterson et al 2012) |
| library_prepared_by | Holly McLean |
| library_status | Data available |
| library_type | ddRAD_AGRF |
| n_libraries_pooled | 3 |
| omg_project | Conservation Genomics |
| order | Diprotodontia |
| phylum | Chordata |
| prior_genetics | unknown |
| sample_quality | good |
| sample_submission_date | 2021-03-23 |
| sequence_length | 150bp SE |
| sequencing_facility | AGRF Melbourne |
| sequencing_platform | illumina NovaSeq 6000 |
| source_population | unknown |
| species | lateralis |
| state_or_region | Western Australia |
| subspecies_or_variant | lateralis |
| taxon_id | 172273 |
| taxonomic_group | marsupial |
| ticket | BPAOPS-1051 |
| tissue_type | ear epithelium |
| trace_lab | no |
| type_status | unknown |
| wild_captive | wild |