Marine Microbes Metatranscriptome 102.100.100/58598

Salmon Haul, Metatranscriptome HiSeq

Dataset size is: 22.75 KiB

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This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

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Geospatial Coverage

Dataset extent

Map tiles & Data by OpenStreetMap, under CC BY SA.
Resource Permissions organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members
Access Control Date 2019-03-06
Access Control Mode date
Sequence Data Type illumina-transcriptomics
am_environment Marine
analysis_software_version bcl2fastq 2.20.0.422
analytical_platform HiSeq
archive_ingestion_date 2018-12-06
bioplatforms_project Marine Microbes Project (MM)
collection_date 2016-06-14T00:00:00
data_generated 2018-12-06
data_type Metatranscriptome
database_schema_definitions_url https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
dataset_url https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/metatranscriptome/agrf/BPAOPS-767/
date_of_transfer 2018-12-06
description MM
facility AGRF
folder_name 20181206_AGRF_BPA_MM_CD2ANANXX
geo_loc_name Australia:Port Hacking
insert_size_range 200.0
lat_lon (decimal_degrees) -34.072929 151.152086
latitude (decimal_degrees) -34.072929
library_construction_protocol TuSeq RNA
longitude (decimal_degrees) 151.152086
omics metatranscriptomics
read_length 250bp
sample_attribution Franziska Wemheuer
sample_database_file AM_db_v4.2_202412051535.db
sample_extraction_id 58598_1
sample_id 102.100.100/58598
sample_metadata_ingest_date 2024-07-01 16:00:42
sample_metadata_ingest_file Sediment_Wemheuer_amdb_formatted_fix_geoloc_date_FullREPLACE_xlsx
sample_site_location_description Salmon Haul
sample_submission_date 2018-12-06
sample_type Sediment
sequencer HiSeq 2500
source_mat_id 102.100.100/58598
ticket BPAOPS-767
url https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/58598
utc_date_sampled 2016-06-14