Marine Microbes Amplicons 18S 102.100.100/58444 C59W3
Dataset size is: 18.07 MiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
| Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
| Access Control Date | 2019-02-20 |
| Access Control Mode | date |
| Sequence Data Type | illumina-amplicons |
| alkalinity (µmol/kg) | 2444.3175 |
| am_environment | Marine |
| ammonium (µmol/L) | 4.4015743667 |
| amplicon | 18S |
| analysis_software_version | 2.6.2.3 |
| analytical_platform | MiSeq |
| archive_ingestion_date | 2018-11-23 |
| biotic_relationship | Free-living |
| chlorophyll_a (mg/m3) | 1.713547189 |
| coastal_id | CB_PL_090317_3 |
| collection_date | 2017-03-09T08:30:00 |
| comments | 58444_1_18S_UNSW_TCCTGAGC_CTAAGCCT_C59W3 |
| conductivity_aqueous (S/m) | 32.96 |
| data_generated | 2018-11-23 |
| data_type | 18S |
| database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx |
| dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/18s/ramaciotti/BPAOPS-752/ |
| date_of_transfer | 2018-11-22 |
| depth (m) | 1.0 |
| depth_lower (m) | 1.0 |
| depth_upper (m) | 1.0 |
| description | MM |
| dilution_used | neat |
| env_medium | Sea water [ENVO_00002149] |
| facility | RAMACIOTTI |
| flow_id | C59W3 |
| folder_name | 20181122_UNSW_BPA_MM_C59W3 |
| geo_loc_name | Australia:New South Wales |
| lat_lon (decimal_degrees) | -33.825633 151.263307 |
| latitude (decimal_degrees) | -33.825633 |
| longitude (decimal_degrees) | 151.263307 |
| mm_amplicon_linkage | C59W3 |
| nitrite (µmol/L) | 0.198934898 |
| omics | Genomics |
| pass_fail | P |
| ph | 8.071 |
| phosphate (µmol/L) | 0.117087881 |
| read_length | 250bp |
| reads | 54330.0 |
| sample_database_file | AM_db_v4.2_202402091224.db |
| sample_extraction_id | 58444_1 |
| sample_id | 102.100.100/58444 |
| sample_metadata_ingest_date | 2021-04-23 11:19:12 |
| sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx |
| sample_metadata_update_history | free_living_biotic_relationship_UPDATE_xlsx; AM_curate_geo_loc_name_UPDATE_xlsx; |
| sample_site_location_description | Cobblers Beach |
| sample_submission_date | 2018-11-22 |
| sample_type | Coastal water |
| source_mat_id | 102.100.100/58444 |
| target | 18S |
| ticket | BPAOPS-754 |
| total_co2 (µmol/kg) | 2156.009766 |
| url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/58444 |
| utc_date_sampled | 2017-03-09 |
| utc_time_sampled | 08:30:00 |