Marine Microbes Amplicons 16S 102.100.100/58019 BMTJN
Dataset size is: 68.52 MiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
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Additional Info Show Blank Fields
Field | Value |
---|---|
Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
Access Control Date | 2018-05-15 |
Access Control Mode | date |
Sequence Data Type | illumina-amplicons |
am_environment | Marine |
amplicon | 16S |
analysis_software_version | 2.6.2.3 |
analytical_platform | MiSeq |
archive_ingestion_date | 2018-02-14 |
biotic_relationship | Host associated |
coastal_id | CB_ER_170816_1 |
collection_date | 2016-08-17T11:00:00 |
comments | 58019_1_16S_UNSW_TGAGCCGG_GATAGCGT_BMTJN |
contextual_data_submission_date | 2017-12-04 |
data_generated | 2018-02-14 |
data_type | 16S |
database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx |
dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/16s/ramaciotti/BPAOPS-512/ |
date_of_transfer | 2018-02-14 |
depth (m) | 1.5 |
depth_lower (m) | 1.5 |
depth_upper (m) | 1.5 |
description | MM |
dilution_used | neat |
env_medium | Sea water [ENVO_00002149] |
facility | RAMACIOTTI |
flow_id | BMTJN |
folder_name | 20180214_UNSW_BPA_MM_BMTJN |
geo_loc_name | Australia:New South Wales |
host_type | Seaweed |
lat_lon (decimal_degrees) | -33.825374 151.263177 |
latitude (decimal_degrees) | -33.825374 |
longitude (decimal_degrees) | 151.263177 |
mm_amplicon_linkage | BMTJN |
ncbi_bioproject_accession | PRJNA385736 |
ncbi_biosample_accession | SAMN09717244 |
omics | Genomics |
pass_fail | P |
read_length | 300bp |
reads | 157159.0 |
sample_database_file | AM_db_v4.2_202402091224.db |
sample_extraction_id | 58019_1 |
sample_id | 102.100.100/58019 |
sample_metadata_ingest_date | 2021-04-23 11:19:12 |
sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx |
sample_metadata_update_history | host_biotic_relationship_UPDATE_xlsx; AM_curate_geo_loc_name_UPDATE_xlsx; Host_NCBI_taxonomies_UPDATE_xlsx; |
sample_site_location_description | Cobblers Beach |
sample_submission_date | 2018-02-14 |
sample_submitter | Jessica Taylor |
sample_type | Seaweed |
source_mat_id | 102.100.100/58019 |
specific_host | Ecklonia radiata [NCBI:txid309355] |
submitter | Jessica Taylor |
target | 16S |
ticket | BPAOPS-512 |
url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/58019 |
utc_date_sampled | 2016-08-17 |
utc_time_sampled | 11:00:00 |