Marine Microbes Amplicons 16S 102.100.100/35827 B9YMG
Dataset size is: 27.47 MiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Additional Info Show Blank Fields
Field | Value |
---|---|
Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
Access Control Date | 2017-09-06 |
Access Control Mode | date |
Sequence Data Type | illumina-amplicons |
am_environment | Marine |
ammonium (µmol/L) | 0.024 |
amplicon | 16S |
analysis_software_version | 2.6.2.3 |
analytical_platform | MiSeq |
archive_ingestion_date | 2017-06-09 |
biotic_relationship | Free-living |
collection_date | 2016-09-07T10:53:34 |
comments | 35827_1_16S_UNSW_GTATGCGC_GATAGCGT_B9YMG |
contextual_data_submission_date | 2017-04-26 |
data_generated | 2017-06-09 |
data_type | 16S |
database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx |
dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/16s/ramaciotti/BPAOPS-200/ |
date_of_transfer | 2017-06-08 |
depth (m) | 0.0 |
depth_lower (m) | 0.0 |
depth_upper (m) | 0.0 |
description | MM |
dilution_used | neat |
env_medium | Sea water [ENVO_00002149] |
facility | RAMACIOTTI |
flow_id | B9YMG |
fluor (AU) | 42.941552 |
folder_name | 20170608_UNSW_BPA_MM_B9YMG |
geo_loc_name | Australia:Tasman Sea |
lat_lon (decimal_degrees) | -36.99762 153.99853 |
latitude (decimal_degrees) | -36.99762 |
longitude (decimal_degrees) | 153.99853 |
mm_amplicon_linkage | B9YMG |
ncbi_bioproject_accession | PRJNA385736 |
ncbi_biosample_accession | SAMN07483085 |
nitrate_nitrite (µmol/L) | 2.879 |
nitrite (µmol/L) | 0.18 |
omics | Genomics |
oxygen (µmol/L) | 257.471 |
oxygen_ctd_wt (µmol/kg) | 255.392557 |
pass_fail | P |
phosphate (µmol/L) | 0.32 |
pres_rel (dbar) | 5.7 |
read_length | 300bp |
reads | 60110.0 |
salinity (PSU) | 35.512866 |
salinity_lab (PSU) | 35.512 |
sample_database_file | AM_db_v4.2_202402091224.db |
sample_extraction_id | 35827_1 |
sample_id | 102.100.100/35827 |
sample_metadata_ingest_date | 2021-04-23 11:19:12 |
sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx |
sample_metadata_update_history | free_living_biotic_relationship_UPDATE_xlsx; |
sample_site_location_description | Transect - Southern |
sample_submission_date | 2017-06-08 |
sample_submitter | Martin Ostrowski |
sample_type | Pelagic |
silicate (µmol/L) | 1.279 |
source_mat_id | 102.100.100/35827 |
submitter | Martin Ostrowski |
target | 16S |
temp (degC) | 15.921834 |
ticket | BPAOPS-200 |
tot_depth_water_col (m) | 4478.0 |
transmittance (%) | 88.539041 |
url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/35827 |
utc_date_sampled | 2016-09-07 |
utc_time_sampled | 10:53:34 |
voyage_code | IN2016_v04 |
work_order | 20007 |