Marine Microbes Amplicons 16S 102.100.100/34300 ATNUK
Dataset size is: 38.74 MiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Data Policy
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Additional Info Show Blank Fields
Field | Value |
---|---|
Geospatial Coverage |
Dataset extentMap tiles & Data by OpenStreetMap, under CC BY SA.
|
Resource Permissions | organization_member_after_embargo:archive_ingestion_date:90:am-consortium-members |
Access Control Date | 2016-11-23 |
Access Control Mode | date |
Sequence Data Type | illumina-amplicons |
am_environment | Marine |
ammonium (µmol/L) | 0.037 |
amplicon | 16S |
analysis_software_version | 2.6.2.3 |
analytical_platform | MiSeq |
archive_ingestion_date | 2016-09-14 |
biotic_relationship | Free-living |
collection_date | 2015-12-04T22:39:44 |
comments | 34300_1_16S_UNSW_ACACCTGG_GATAGCGT_ATNUK |
contextual_data_submission_date | 2016-07-19 |
data_generated | 2016-09-14 |
data_type | 16S |
database_schema_definitions_url | https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx |
dataset_url | https://downloads-qcif.bioplatforms.com/bpa/marine_microbes/raw/amplicons/16s/ramaciotti/BPAOPS-7/ |
date_of_transfer | 2016-08-25 |
depth (m) | 76.0 |
depth_lower (m) | 76.0 |
depth_upper (m) | 76.0 |
description | MM |
dilution_used | Neat |
env_medium | Sea water [ENVO_00002149] |
facility | RAMACIOTTI |
flow_id | ATNUK |
folder_name | 20160825_UNSW_BPA_MM_ATNUK |
geo_loc_name | Australia:Great Australian Bight |
lat_lon (decimal_degrees) | -35.04845 134.0896 |
latitude (decimal_degrees) | -35.04845 |
longitude (decimal_degrees) | 134.0896 |
mm_amplicon_linkage | ATNUK |
ncbi_bioproject_accession | PRJNA385736 |
ncbi_biosample_accession | SAMN07482701 |
nitrate_nitrite (µmol/L) | 0.478 |
nitrite (µmol/L) | 0.036 |
omics | Genomics |
oxygen_ctd_wt (µmol/kg) | 251.8 |
pass_fail | P |
phosphate (µmol/L) | 0.176 |
pres_rel (dbar) | 75.5 |
read_length | 300bp |
reads | 79834.0 |
salinity (PSU) | 35.567 |
sample_database_file | AM_db_v4.2_202402091224.db |
sample_extraction_id | 34300_1 |
sample_id | 102.100.100/34300 |
sample_metadata_ingest_date | 2021-04-23 11:19:12 |
sample_metadata_ingest_file | MM_curated_metadata_UTC_Upper_lower_depth_Amm_bad_sampleCurated_NRS_removed_Chl_merge_xlsx |
sample_metadata_update_history | free_living_biotic_relationship_UPDATE_xlsx; |
sample_site_location_description | T5-400 |
sample_submission_date | 2016-08-25 |
sample_submitter | Jodie van de Kamp |
sample_type | Pelagic |
silicate (µmol/L) | 1.226 |
source_mat_id | 102.100.100/34300 |
submitter | Jodie van de Kamp |
target | 16S |
temp (degC) | 14.957 |
ticket | BPAOPS-7 |
tot_depth_water_col (m) | 410.0 |
url | https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/34300 |
utc_date_sampled | 2015-12-04 |
utc_time_sampled | 22:39:44 |
voyage_code | IN2015_C02 |
work_order | 8 |