GAP PromethION, Reference genomes, 378099
Dataset size is: 700.31 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-06-21 |
| Access Control Mode | date |
| Sequence Data Type | ont-promethion |
| bait_set_reference | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/ont-promethion/BPAOPS-1287/20220621_GAP_UNSW_PAK15599/ |
| ccg_jira_ticket | BPAOPS-1287 |
| cell_postion | 6G |
| country | Australia |
| data_type | Main dataset (Phase 3 ref genomes) |
| dataset_id | 83717 |
| date_data_published | 30/6/2022 |
| date_of_transfer | 2022-06-21 |
| date_of_transfer_to_archive | 2022-06-23 |
| description | PromethION |
| download | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1287 |
| facility | UNSW |
| family | Dilleniaceae |
| flow_cell_id | PAK15599 |
| flow_cell_type | FLO-PRO002 |
| folder_name | 20220621_GAP_UNSW_PAK15599 |
| genomic_material_associated_references | https://www.protocols.io/view/scalable-high-molecular-weight-dna-extraction-for-bnjhmcj6 |
| genomic_material_preparation_date | 2022-01-27 |
| genomic_material_preparation_materials | In the protocol |
| genomic_material_preparation_process | https://www.protocols.io/view/scalable-high-molecular-weight-dna-extraction-for-bnjhmcj6 |
| genomic_material_preparation_type | gDNA |
| genomic_material_prepared_by | Kor-jent van Dijk |
| herbarium_code | AD |
| id_vetting_by | T.A. Hammer |
| id_vetting_date | 2021-10-07 |
| library_construction_protocol | SQK_ LSK110 |
| library_id | 102.100.100/382902 |
| living_collections_catalog_number | BGSH Living Collections database 20090956 |
| living_collections_event_date | 2022-01-27 |
| living_collections_record_number | NA |
| living_collections_recorded_by | T.A. Hammer |
| location_id | Adelaide Botanic Gardens |
| location_notes | Plant farthest to the left |
| metadata_revision_date | 2023-12-08 |
| metadata_revision_filename | 2023-12-08_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Yes |
| nagoya_protocol_permit_number | G25787-5 |
| nanopore_software_version | 22.05.7 |
| preservation_date_begin | 2022-01-27 |
| preservation_temperature | 4°C |
| preservation_type | DNA |
| project_aim | Reference genomes |
| sample_id | 102.100.100/378099 |
| sample_submission_date | 2022-05-20 |
| sample_submitter_email | michelle.waycott@adelaide.edu.au |
| sample_submitter_name | Michelle Waycott |
| scientific_name | Hibbertia scandens |
| scientific_name_authorship | (Willd.) Dryand. |
| sequencer | PromethION |
| state_or_territory | SA |
| ticket | BPAOPS-1287 |
| voucher_herbarium_catalog_number | AD286516 |
| voucher_herbarium_collector_id | T.A. Hammer |
| voucher_herbarium_event_date | 2021-06-28 |
| voucher_herbarium_record_number | 101 |