GAP Illumina short read, Phylogenomics, 81231, Angiosperms353 bait kit (Dataset 2)

Isopogon anemonifolius (Salisb.) Knight, Proteaceae, Hervé Sauquet | NSW-NE

Dataset size is: 390.48 MiB

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Data and Resources

This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member
Access Control Date 2022-02-11
Access Control Mode date
Sequence Data Type illumina-shortread
analysissoftwareversion NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422
bait_set_name Angiosperms353 bait kit (Dataset 2)
bait_set_reference 10.1093/sysbio/syy086
base_url https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1029/20210211_GAP_AGRF_CAGRF21025257_HY7KVDRXX/
ccg_jira_ticket BPAOPS-1029
data_type Main dataset (AATOL Stage 1)
dataset_id 83676
date_of_transfer 2021-02-11
date_of_transfer_to_archive 2021-03-05
description Illumina Short Read
dna_extract No - Plant Material sent to AGRF for DNA extraction
facility AGRF
family Proteaceae
flow_cell_id HY7KVDRXX
folder_name 20210211_GAP_ AGRF_CAGRF21025257_HY7KVDRXX
genomic_material_preparation_process Qiagen DNeasy 96 Plant Kit
genomic_material_preparation_type gDNA
genomic_material_prepared_by AGRF (Sep-Oct 2020)
herbarium_code NSW
id_vetting_by H. Sauquet
id_vetting_date 2020-08-11
library_construction_protocol NEBNext Ultra II DNA with MyBaits Angio353 Capture
library_id 83437
metadata_revision_date 2023-12-08
metadata_revision_filename 2023-12-08_Combined_plant_sample_metadata_forQCIF.xlsx
nagoya_protocol_compliance Yes
nagoya_protocol_permit_number SL100569
project_aim Phylogenomics
run_format 150PE
sample_id 102.100.100/81231
sample_submission_date 2020-09-16
sample_submitter_email herve.sauquet@gmail.com
sample_submitter_name Hervé Sauquet | NSW-NE
scientific_name Isopogon anemonifolius
scientific_name_authorship (Salisb.) Knight
sequencer NovaSeq 6000
silica_gel Yes
silica_gel_id NSW1099570
ticket BPAOPS-1029
voucher_herbarium_catalog_number NSW1099569
voucher_herbarium_collector_id Hervé Sauquet
voucher_herbarium_event_date 2020-08-11
voucher_herbarium_record_number H. Sauquet 247
voucher_herbarium_recorded_by NSW