GAP Illumina short read, Phylogenomics, 80877, Angiosperms353 bait kit (Dataset 1)
Dataset size is: 276.19 MiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Data Policy
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Additional Info Show Blank Fields
Field | Value |
---|---|
Resource Permissions | organization_member |
Access Control Date | 2021-11-18 |
Access Control Mode | date |
Sequence Data Type | illumina-shortread |
analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422 |
bait_set_name | Angiosperms353 bait kit (Dataset 1) |
bait_set_reference | 10.1093/sysbio/syy086 |
base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-984/20201116_GAP_AGRF_CAGRF20083582_HVM7GDRXX/ |
ccg_jira_ticket | BPAOPS-984 |
data_type | Main dataset (AATOL Stage 1) |
dataset_id | 83653 |
date_of_transfer | 2020-11-18 |
date_of_transfer_to_archive | 2020-11-19 |
description | Illumina Short Read |
dna_extract | No - Plant Material sent to AGRF for DNA extraction |
facility | AGRF |
family | Malvaceae |
flow_cell_id | HVM7GDRXX |
folder_name | 20201116_GAP_AGRF_CAGRF20083582_HVM7GDRXX |
genomic_material_preparation_process | Qiagen DNeasy 96 Plant Kit |
genomic_material_preparation_type | gDNA |
genomic_material_prepared_by | AGRF (Aug-Sep 2020) |
herbarium_code | AD |
id_vetting_date | 2020-06-25 |
library_construction_protocol | NEBNext Ultra II DNA with MyBaits Angio353 Capture |
library_id | 83068 |
metadata_revision_date | 2024-07-11 |
metadata_revision_filename | 2024-07-11_Combined_plant_sample_metadata_forQCIF.xlsx |
nagoya_protocol_compliance | Pre-Nagoya |
nagoya_protocol_permit_number | not applicable |
project_aim | Phylogenomics |
run_format | 100PE |
sample_id | 102.100.100/80877 |
sample_submission_date | 2020-08-27 |
sample_submitter_email | michelle.waycott@sa.gov.au |
sample_submitter_name | Michelle Waycott |
scientific_name | Sida hookeriana |
scientific_name_authorship | Miq. |
sequencer | NovaSeq 6000 |
silica_gel | no |
ticket | BPAOPS-984 |
voucher_herbarium_catalog_number | AD 125656 |
voucher_herbarium_collector_id | W.R. Barker | R.M. Barker |
voucher_herbarium_event_date | 2001-12-08 |
voucher_herbarium_record_number | 8361 |
voucher_herbarium_recorded_by | W.R. Barker | R.M. Barker |