GAP Illumina short read, Phylogenomics, 79643, Angiosperms353 bait kit

Ewartia nubigena (F.Muell.) Beauverd, Asteraceae, Alexander Schmidt-Lebuhn | CSIRO

Dataset size is: 117.00 MiB

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Data and Resources

This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member
Access Control Date 2021-06-25
Access Control Mode date
Sequence Data Type illumina-shortread
analysissoftwareversion Illumina RTA v2.11.3, Illumina bcl2fastq v2.20.0.422
bait_set_name Angiosperms353 bait kit
bait_set_reference 10.1093/sysbio/syy086
base_url https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-931/
ccg_jira_ticket BPAOPS-931
data_type Pilot
dataset_id 83650
date_of_transfer 2020-06-25
date_of_transfer_to_archive 2020-07-08
description Illumina Short Read
download https://data.bioplatforms.com/organization/bpa-plants?q=ticket%3ABPAOPS-931&sort=score+desc%2C+metadata_modified+desc
facility AGRF
family Asteraceae
flow_cell_id HF7CKAFX2
folder_name 20200625_GAP_AGRF_HF7CKAFX2 (Angio353 - except Korjent data)
genomic_material_associated_references not yet published
genomic_material_preparation_materials Invisorb Spin Plant Mini Kit
genomic_material_preparation_process (The TDWG page does not appear to provide any guidance on what information is desired in this column. The process was DNA extraction.)
genomic_material_preparation_type gDNA from leaf tissue
genomic_material_prepared_by Jessica Bovill | CSIRO
herbarium_code CBG
id_vetting_by Alexander Schmidt-Lebuhn
library_construction_protocol (The TDWG page does not appear to provide any guidance on what information is desired in this column. The process was DNA extraction.), Angio353 MyBaits
library_id 81656
living_collections_catalog_number not applicable
living_collections_record_number not applicable
living_collections_recorded_by not applicable
metadata_revision_date 2024-10-10
metadata_revision_filename 2024-10-08_Combined_plant_sample_metadata_forQCIF.xlsx
nagoya_protocol_compliance Pre-Nagoya
project_aim Phylogenomics
sample_id 102.100.100/79643
sample_submitter_email alexander.s-l@csiro.au
sample_submitter_name Alexander Schmidt-Lebuhn | CSIRO
scientific_name Ewartia nubigena
scientific_name_authorship (F.Muell.) Beauverd
sequencer NextSeq 500
ticket BPAOPS-931
voucher_herbarium_catalog_number CBG 9707631
voucher_herbarium_collector_id Donaldson, S.
voucher_herbarium_event_date 1997-04-20
voucher_herbarium_record_number Donaldson 1111
voucher_herbarium_recorded_by Donaldson, S.