GAP Illumina short read, Reference genomes, 376415
Dataset size is: 4.51 GiB
This dataset is currently under a short embargo period until October 4, 2025 to enable primary access by research partners.
If you would like access during this period please contact us here or contact the project lead directly (see details in the table below) for collaboration opportunities.
Data and Resources
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
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376415_LibID380636_GAP_AGRF_22T7... Metadata Only FASTQ
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2025-10-04 |
| Access Control Mode | date |
| Sequence Data Type | illumina-shortread |
| analysissoftwareversion | NovaSeq X Control Software v1.2.2.48004; Real Time Analysis v4.6.7; Dragen BCL Convert v07.021.645.4.0.3 |
| bait_set_reference | NA |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1698/20241004_GAP_AGRF_CAGRF24050367_22T7FFLT3/ |
| ccg_jira_ticket | BPAOPS-1698 |
| country | Australia |
| data_type | Main dataset (Phase 2 ref genomes) |
| dataset_id | 83687 |
| date_of_transfer | 2024-10-04 |
| date_of_transfer_to_archive | 2024-10-06 |
| description | Illumina Short read |
| facility | AGRF |
| family | Asteraceae |
| flow_cell_id | 22T7FFLT3 |
| folder_name | 20241004_ GAP_ AGRF_CAGRF24050367_22T7FFLT3 |
| herbarium_code | CANB |
| id_vetting_by | Schmidt-Lebuhn, Alexander |
| library_construction_protocol | Illumina Stranded mRNA (RNA-Seq) |
| library_id | 380636 |
| living_collections_material_sample_rna | Fruit |
| location_notes | Edge of Mt Majura Nature Reserve towards Federal Hwy |
| metadata_revision_date | 2024-10-10 |
| metadata_revision_filename | 2024-10-08_Combined_plant_sample_metadata_forQCIF.xlsx |
| nagoya_protocol_compliance | Yes |
| nagoya_protocol_permit_number | ACT PERMIT PL2018160 |
| preservation_temperature | −80°C |
| preservation_type | Tissue - freezing |
| project_aim | Reference genomes |
| sample_id | 102.100.100/376415 |
| sample_submitter_email | alexander.schmidt-lebuhn@csiro.au |
| sample_submitter_name | Schmidt-Lebuhn, Alexander |
| scientific_name | Leucochrysum albicans |
| scientific_name_authorship | (A.Cunn.) Paul G.Wilson |
| scientific_name_notes | subsp. tricolor (DC.) N.G.Walsh |
| sequencer | NovaSeq X Plus |
| state_or_territory | ACT |
| ticket | BPAOPS-1698 |
| voucher_herbarium_catalog_number | CANB 920543.1 |
| voucher_herbarium_collector_id | Schmidt-Lebuhn, Alexander |
| voucher_herbarium_event_date | 2021-01-12 |
| voucher_herbarium_record_number | 1997 |
| voucher_herbarium_recorded_by | Schmidt-Lebuhn, Alexander |