GAP ddRAD, Conservation genomics, Dataset ID 83660
Dataset size is: 55.68 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Access Control Date | 2023-08-22 |
| Access Control Mode | date |
| Sequence Data Type | illumina-ddrad |
| bait_set_name | Not applicable |
| bait_set_reference | Not applicable |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/ddrad/BPAOPS-1316/AGRF_GAP_HGLL5DRX2_83660/ |
| country | Australia |
| data_type | Main dataset |
| dataset_id | 102.100.100/83660 |
| dataset_url | https://data.bioplatforms.com/dataset?ext_search_by=&q=ticket%3ABPAOPS-1316 |
| date_of_transfer | 2022-08-22 |
| date_of_transfer_to_archive | 2022-08-13 |
| description | ddRAD - 1st run |
| experimental_design | EcoRI & HpyCH4IV |
| family | Asteraceae |
| flowcell_id | HGLL5DRX2 |
| folder_name | AGRF_GAP_ HGLL5DRX2_83660 |
| genomic_material_prepared_by | AGRF (June 2022) |
| id_vetting_by | Andre Messina |
| id_vetting_date | 2022-06-01 |
| library_pcr_cycles | 11 |
| library_pcr_reps | 7 |
| library_prep_date | 2022-07-25 |
| library_prep_method | ddRAD (based on Peterson et al 2012) |
| library_prepared_by | Simon Farrelly |
| library_type | ddRAD |
| metadata_revision_date | 2023-12-08 |
| metadata_revision_filename | 2023-12-08_Combined_plant_sample_metadata_forQCIF.xlsx |
| n_libraries_pooled | 2 |
| nagoya_protocol_compliance | Yes |
| plate_name | 1.0 |
| project_aim | Conservation genomics |
| sample_submission_date | 2022-06-01 |
| sample_submitter_email | andre.messina@rbg.vic.gov.au |
| sample_submitter_name | Andre Messina |
| scientific_name | Olearia aff ramulosa , Olearia microphylla , Olearia minor , Olearia ramulosa , Olearia ramulosa ?var longisetosa , Olearia ramulosa var. tomentosa , Olearia stricta subsp. stricta |
| sequence_length | 150 PE |
| sequencing_facility | AGRF Melbourne |
| sequencing_platform | Illumina NovaSeq 6000 |
| silica_gel | Yes |
| species_complex | Olearia ramulosa species complex |
| ticket | BPAOPS-1316 |