ARP Transcriptomics Hiseq 50310
Dataset size is: 1.30 GiB
Data and Resources
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC2K5ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC2K5ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC2K5ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC2K5ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
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50310_PE_230bp_SEP_AGRF_CC1K3ANX... Metadata Only FASTQ
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
Field | Value |
---|---|
Resource Permissions | organization_member |
Sequence Data Type | illumina-transcriptomics |
analytical_platform | HiSeq |
archive_ingestion_dates | 21/12/2017 |
barcode_tag | AGTACTCC-AACCTGTT |
casava_version | bcl2fastq v2.20.0.422 |
contact_researcher | James Paton/Claudia Trappetti |
contextual_data_submission_date | 2017-10-31 |
culture_collection_date | 1988-11-11 |
data_generated | True |
data_type | Main dataset |
facility | AGRF |
flow_cell_ids | CC1K3ANXX, CC2K5ANXX |
gram_stain | POS |
growth_condition_growth_phase | N/A |
growth_condition_media | N/A |
growth_condition_od600_reading | 0.5 |
growth_condition_temperature | 37.0 |
growth_condition_time_(h) | 2 hrs exposure to sera |
growth_media | Pooled sera |
host_location | South Australia, Australia (Adelaide) |
isolation_source | Blood |
key_virulence_genes | Unknown but likely has a prophage and ~4 kb plasmid |
library_construction_protocol | Truseq Stranded mRNA |
omics | Transcriptomics |
publication_reference | Infect Immun. 83(12):4781-90 (2015) |
replicate | 4 |
sample | 51515 |
sample_id | 102.100.100/50310 |
sample_submission_date | 2017-10-31 |
sample_type | RNA |
sequencer | HiSeq 2500 |
serovar | 14 |
strain_description | ST15 |
strain_or_isolate | 4559 |
taxon_or_organism | Streptococcus pneumoniae |
ticket | BPAOPS-445 |