ARP Proteomics MS1Quantification 51637
Dataset size is: 2.52 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | proteomics |
| acquisition_mode_fragmentation | DDA Top12 / HCD |
| analytical_platform | MS1 quantification |
| archive_ingestion_date | 2018-11-27 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/sepsis/proteomics/raw/ms1quantification/mbpf/BPAOPS-757/ |
| contact_researcher | Dick Strugnell |
| contextual_data_submission_date | 2018-08-17 |
| culture_collection_date | ethics embargo |
| data_generated | True |
| data_type | Main dataset |
| facility | MBPF |
| facility_code | mbpf |
| gradient_time | 120.0 |
| gram_stain | NEG |
| growth_condition_growth_phase | N/A |
| growth_condition_media | Pooled sera |
| growth_condition_od600_reading | N/A |
| growth_condition_temperature | 37.0 |
| growth_condition_time_(h) | 2 hrs exposure to sera |
| growth_media | Pooled sera |
| host_age | ethics embargo |
| host_disease_outcome | ethics embargo |
| host_dob | ethics embargo |
| host_location | ethics embargo |
| host_sex | ethics embargo |
| isolation_source | ethics embargo |
| key_virulence_genes | ethics embargo |
| lc_column_type | Thermo Ultimate 3000 RSLCnano / Thermo Acclaim PepMap RSLC P/N 164540 |
| mass_spectrometer | Thermo QExactivePlus |
| omics | Proteomics |
| peptide_resuspension_protocol | Tip-probe sonicate 2x 30s in solvent intended for injection (e.g 90% MeCN/0.1% TFA) |
| protein_yield_facility | 200.0 |
| protein_yield_total | 400.0 |
| raw_file_name | 51637_SEP_MBPF_MS_QEPlus1_P16_0062_Exp19.raw |
| replicate | 3 |
| sample_id | 102.100.100/51637 |
| sample_on_column | 2.0 |
| sample_submission_date | 2018-08-21 |
| sample_type | HLB-cleaned peptides |
| serovar | ethics embargo |
| strain_description | ethics embargo |
| strain_or_isolate | KPC2 |
| taxon_or_organism | Klebsiella pneumoniae |
| ticket | BPAOPS-757 |
| treatment | 10mM DTT, 20mM IAA, 1:25µg trypsin 37C 24h |