ARP Proteomics MS1Quantification 50583
Dataset size is: 1.87 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Data Policy
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | proteomics |
| acquisition_mode_fragmentation | DDA top 12 / HCD |
| analytical_platform | MS1 quantification |
| archive_ingestion_date | 2017-10-16 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/sepsis/proteomics/raw/ms1quantification/mbpf/BPAOPS-351/ |
| contact_researcher | Tim Stinear |
| contextual_data_submission_date | 2017-07-31 |
| culture_collection_date | 2007-12-14 |
| data_generated | True |
| data_type | Main dataset |
| facility | MBPF |
| facility_code | mbpf |
| gradient_time | 120.0 |
| gram_stain | POS |
| growth_condition_growth_phase | Mid log phase |
| growth_condition_media | RPMI |
| growth_condition_od600_reading | 0.4 |
| growth_condition_temperature | 37.0 |
| growth_condition_time_(h) | 1 hr |
| growth_media | RPMI |
| host_age | 43 |
| host_disease_outcome | Bacteraemia |
| host_location | Victoria, Australia (Melbourne) |
| host_sex | M |
| isolation_source | Blood culture |
| lc_column_type | Thermo Ultimate 3000 RSLCnano / Thermo Acclaim PepMap RSLC P/N 164540 |
| mass_spectrometer | Thermo QExactive Plus |
| omics | Proteomics |
| protein_yield_facility | 146.0 |
| protein_yield_total | 292.0 |
| publication_reference | Holmes, N. et al., - unpublished |
| raw_file_name | 50583_SEP_MBPF_MS_QEPlus1_P16_0062_Exp15.raw |
| replicate | 6 |
| sample_id | 102.100.100/50583 |
| sample_on_column | 2.0 |
| sample_submission_date | 2017-07-31 |
| sample_type | Dried peptides |
| strain_description | ST5 MSSA |
| strain_or_isolate | BPH2819 |
| taxon_or_organism | Staphylococcus aureus |
| ticket | BPAOPS-351 |
| treatment | Staphylolysin 60µg 37C 2h; 10mM DTT, 20mM IAA, 1:25µg trypsin 37C 24h |