ARP Proteomics MS1Quantification 50168
Dataset size is: 2.76 GiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | proteomics |
| acquisition_mode_fragmentation | DDA Top12 / HCD |
| additional_notes | 20 ml culture_mutanolysin |
| analytical_platform | MS1 quantification |
| archive_ingestion_date | 2018-03-23 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/sepsis/proteomics/raw/ms1quantification/mbpf/BPAOPS-556/ |
| contact_researcher | James Paton/Claudia Trappetti |
| contextual_data_submission_date | 2017-10-31 |
| culture_collection_date | 1989-07-28 |
| data_generated | True |
| data_type | Main dataset |
| facility | MBPF |
| facility_code | mbpf |
| gradient_time | 120.0 |
| gram_stain | POS |
| growth_condition_growth_phase | Mid log phase |
| growth_condition_media | RPMI + galactose |
| growth_condition_od600_reading | 0.25 |
| growth_condition_temperature | 37.0 |
| growth_media | RPMI + galactose |
| host_location | South Australia, Australia (Adelaide) |
| isolation_source | Ear |
| key_virulence_genes | Unknown |
| lc_column_type | Thermo Ultimate 3000 RSLCnano / Thermo Acclaim PepMap RSLC P/N 164540 |
| mass_spectrometer | Thermo QExactivePlus |
| omics | Proteomics |
| protein_yield_facility | 39.0 |
| protein_yield_total | 78.0 |
| publication_reference | Infect Immun. 81(2):505-13 (2013) |
| raw_file_name | 50168_SEP_MBPF_MS_Fusion_P16_0062_Exp20.raw |
| replicate | 6 |
| sample_id | 102.100.100/50168 |
| sample_on_column | 2.0 |
| sample_submission_date | 2017-10-31 |
| sample_type | Dried peptides |
| serovar | 3 |
| strain_description | ST180 |
| strain_or_isolate | 180/2 |
| taxon_or_organism | Streptococcus pneumoniae |
| ticket | BPAOPS-556 |
| treatment | 25U mutanolysin 37C 2h, 10mM DTT, 20mM IAA, 1:25 ug trypsin |