ARP Metabolomics LCMS 51221
Dataset size is: 21.45 MiB
Data and Resources
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | metabolomics |
| acquisition_mode | Negative Ion (25 - 1200 mz; 0.9 spectra/sec) |
| analytical_platform | GC-MS |
| archive_ingestion_date | 2018-07-12 |
| contact_researcher | Mark Walker |
| contextual_data_submission_date | 2005-04-18 |
| culture_collection_date | 2010-07-05 |
| culture_collection_id | SP474 |
| data_generated | True |
| data_type | Main dataset |
| facility | MA |
| gradient_time_min_flow | 21 min / 0.3 ml/min |
| gram_stain | POS |
| growth_condition_growth_phase | Mid log phase |
| growth_condition_media | RPMI_modified |
| growth_condition_od600_reading | 0.4 |
| growth_condition_temperature | 37.0 |
| growth_condition_time_(h) | 1 hr |
| growth_media | RPMI_modified |
| host_age | NA |
| host_description | NA |
| host_disease_outcome | Puerperal sepsis |
| host_dob | NA |
| host_location | New South Wales, Australia |
| host_sex | F |
| isolation_source | Vaginal swab |
| key_virulence_genes | SpeB +ve, PCR +ve for GBS genes (vaginal colonisation) |
| lc_column_type | Agilent 1290 / Merck ZIC-p HILIC SeQuant (4.6 mm) |
| mass_spectrometer | Agilent 6545 Qtof |
| omics | Metabolomics |
| publication_reference | J Clin Micro 50:2224-2228 (2012) |
| raw_file_name | 51221_Sep_MA_LCMS_PS003_4_589_34273_Bio21-LC-QTOF-6545.tar.gz |
| replicate | 4 |
| sample_fractionation_extract_solvent | Polar metabolite / Methanol:Water |
| sample_id | 102.100.100/51221 |
| sample_submission_date | 2018-04-05 |
| serovar | M77, unusual M type associated with peurperal sepsis |
| strain_description | Isolated during suspected outbreak in NSW, Australia |
| strain_or_isolate | PS003 |
| taxon_or_organism | Streptococcus pyogenes |
| ticket | BPAOPS-633 |