ARP Metabolomics GCMS 51218
Dataset size is: 12.93 MiB
Data and Resources
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | metabolomics |
| acquisition_mode | Negative Ion (45-600 mz: 2000 scan speed) |
| archive_ingestion_date | 2018-07-12 |
| contact_researcher | Mark Walker |
| contextual_data_submission_date | 5/4/18 |
| culture_collection_date | 2010-07-05 |
| culture_collection_id | SP474 |
| data_generated | True |
| data_type | Main dataset |
| facility | MA |
| gc_column_type | Agilent DB-5; 1um film thickness; 0.250mm diameter; 30m length |
| gradient_time_min_flow | 37 minutes method: starting temp 100°C with hold time of 4 minutes. Temperature ramped up by 10°C per minute for 22 minutes and held at 320°C for 11 minutes. |
| gram_stain | POS |
| growth_media | RPMI_modified |
| host_age | NA |
| host_description | NA |
| host_disease_outcome | Puerperal sepsis |
| host_dob | NA |
| host_location | New South Wales, Australia |
| host_sex | F |
| isolation_source | Vaginal swab |
| key_virulence_genes | SpeB +ve, PCR +ve for GBS genes (vaginal colonisation) |
| mass_spectrometer | Shimadzu TQ8040 |
| omics | Metabolomics |
| publication_reference | J Clin Micro 50:2224-2228 (2012) |
| raw_file_name | 51218_Sep_MA_GCMS_PS003_1_594_34709_BIO21_GCQQQ_Shimadzu.qgd |
| replicate | 1 |
| sample_fractionation_extract_solvent | Polar metabolite / Methanol:Water |
| sample_id | 102.100.100/51218 |
| sample_submission_date | 5/4/18 |
| serovar | M77, unusual M type associated with peurperal sepsis |
| strain_description | Isolated during suspected outbreak in NSW, Australia |
| strain_or_isolate | PS003 |
| taxon_or_organism | Streptococcus pyogenes |
| ticket | BPAOPS-634 |