ARP Metabolomics GCMS 51190

ARP Metabolomics GCMS Raw Data: Streptococcus pyogenes 5448 Pooled sera Replicate 3

Dataset size is: 12.67 MiB

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Data and Resources

This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member
Sequence Data Type metabolomics
acquisition_mode Negative Ion (45-600 mz: 2000 scan speed)
archive_ingestion_date 2018-07-12
contact_researcher Mark Walker
contextual_data_submission_date 5/4/18
culture_collection_date pre-2000
culture_collection_id SP137
data_generated True
data_type Main dataset
facility MA
gc_column_type Agilent DB-5; 1um film thickness; 0.250mm diameter; 30m length
gradient_time_min_flow 37 minutes method: starting temp 100°C with hold time of 4 minutes. Temperature ramped up by 10°C per minute for 22 minutes and held at 320°C for 11 minutes.
gram_stain POS
growth_media Pooled sera
host_age NA
host_description NA
host_disease_outcome Toxic shock syndrome and necrotizing fasciitis
host_dob NA
host_location Ontario, Canada
isolation_source Blood
key_virulence_genes SpeB +ve
mass_spectrometer Shimadzu TQ8040
omics Metabolomics
publication_reference Infect Immun 68: 6362-6369 (2000)
raw_file_name 51190_Sep_MA_GCMS_5448_3_594_34681_BIO21_GCQQQ_Shimadzu.qgd
replicate 3
sample_fractionation_extract_solvent Polar metabolite / Methanol:Water
sample_id 102.100.100/51190
sample_submission_date 5/4/18
serovar M1T1 clone
strain_description Extensively studied, global reference strain. Representative of serotype M1T1 clone. Tn-seq library available
strain_or_isolate 5448
taxon_or_organism Streptococcus pyogenes
ticket BPAOPS-634