ARP Metabolomics GCMS 50937
Dataset size is: 12.98 MiB
Data and Resources
This data is made available openly under a Creative Commons Attribution license.
Please see the initiative
Data Policy
for attribution information.
Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | metabolomics |
| acquisition_mode | Negative Ion (45-600 mz: 2000 scan speed) |
| archive_ingestion_date | 2018-07-12 |
| contact_researcher | Steven Djordjevic |
| contextual_data_submission_date | 14/11/17 |
| culture_collection_id | E. coli strain 2009-25 |
| data_generated | True |
| data_type | Main dataset |
| facility | MA |
| gc_column_type | Agilent DB-5; 1um film thicknes; 0.250mm diameter; 30m length |
| gradient_time_min_flow | 37 minutes method: starting temp 100°C with hold time of 4 minutes. Temperature ramped up by 10°C per minute for 22 minutes and held at 320°C for 11 minutes. |
| gram_stain | NEG |
| growth_media | RPMI |
| host_age | 72 |
| host_disease_outcome | Urosepsis |
| host_location | New South Wales, Australia (Sydney Adventist Hospital) |
| host_sex | M |
| isolation_source | Blood |
| key_virulence_genes | Multi-drug resistant extended-spectrum beta lactamase producer. Carries a copper resistance operon and hlyE. Paired urine isolate available. |
| mass_spectrometer | Shimadzu TQ8040 |
| omics | Metabolomics |
| raw_file_name | 50937_Sep_MA_GCMS_MS85R-1-581-33937_Bio21_GC-QQQ-Shimadzu.qgd |
| replicate | 1 |
| sample_fractionation_extract_solvent | Polar metabolite / Methanol:Water |
| sample_id | 102.100.100/50937 |
| sample_submission_date | 13/11/17 |
| strain_description | ST648 |
| strain_or_isolate | MS14385 |
| taxon_or_organism | Escherichia coli |
| ticket | BPAOPS-631 |