ARP Metabolomics GCMS 50913
Dataset size is: 13.05 MiB
Data and Resources
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | metabolomics |
| acquisition_mode | Negative Ion (45-600 mz: 2000 scan speed) |
| archive_ingestion_date | 2018-07-12 |
| contact_researcher | Mark Schembri |
| contextual_data_submission_date | 14/11/17 |
| culture_collection_date | 2007-06-?? |
| culture_collection_id | B36EC; MS11317 |
| data_generated | True |
| data_type | Main dataset |
| facility | MA |
| gc_column_type | Agilent DB-5; 1um film thickness; 0.250mm diameter; 30m length |
| gradient_time_min_flow | 37 minutes method: starting temp 100°C with hold time of 4 minutes. Temperature ramped up by 10°C per minute for 22 minutes and held at 320°C for 11 minutes. |
| gram_stain | NEG |
| growth_media | RPMI |
| host_disease_outcome | Pyelonephritis |
| host_location | Queensland, Australia (Queen Elizabeth II Jubilee Hosptial, Brisbane) |
| host_sex | F |
| isolation_source | Blood |
| key_virulence_genes | kpsMTII, fimH, afa/dra, iha, iutA, fyuA; Clade C2 ST131 |
| mass_spectrometer | Shimadzu TQ8040 |
| omics | Metabolomics |
| publication_reference | PNAS.111(15):5694-9 (2014) |
| raw_file_name | 50913_Sep_MA_GCMS_B36R-1-581-33919_Bio21_GC-QQQ-Shimadzu.qgd |
| replicate | 1 |
| sample_fractionation_extract_solvent | Polar metabolite / Methanol:Water |
| sample_id | 102.100.100/50913 |
| sample_submission_date | 13/11/17 |
| strain_description | ST131 |
| strain_or_isolate | B36 |
| taxon_or_organism | Escherichia coli |
| ticket | BPAOPS-631 |