ARP Metabolomics GCMS 50207
Dataset size is: 11.98 MiB
Data and Resources
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Additional Info Show Blank Fields
| Field | Value |
|---|---|
| Resource Permissions | organization_member |
| Sequence Data Type | metabolomics |
| acquisition_mode | Negative Ion (45-600 mz: 2000 scan speed) |
| archive_ingestion_date | 2018-07-12 |
| contact_researcher | James Paton/Claudia Trappetti |
| contextual_data_submission_date | 31/10/17 |
| culture_collection_date | 1988-11-11 |
| data_generated | True |
| data_type | Main dataset |
| facility | MA |
| gc_column_type | Agilent DB-5; 1um film thicknes; 0.250mm diameter; 30m length |
| gradient_time_min_flow | 37 minutes method: starting temp 100°C with hold time of 4 minutes. Temperature ramped up by 10°C per minute for 22 minutes and held at 320°C for 11 minutes. |
| gram_stain | POS |
| growth_media | RPMI + galactose |
| host_location | South Australia, Australia (Adelaide) |
| isolation_source | Blood |
| key_virulence_genes | Unknown but likely has a prophage and ~4 kb plasmid |
| mass_spectrometer | Shimadzu TQ8040 |
| omics | Metabolomics |
| publication_reference | Infect Immun. 83(12):4781-90 (2015) |
| raw_file_name | 50207_Sep_MA_GCMS_4559A-3-562-31332_Bio21-GC-QQQ-Shimadzu.qgd |
| replicate | 3 |
| sample_fractionation_extract_solvent | Polar metabolite / Methanol:Water |
| sample_id | 102.100.100/50207 |
| sample_submission_date | 31/10/17 |
| serovar | 14 |
| strain_description | ST15 |
| strain_or_isolate | 4559 |
| taxon_or_organism | Streptococcus pneumoniae |
| ticket | BPAOPS-630 |