Australian Microbiome Amplicons 16S 102.100.100/138592 KD7T7

king crossing, 16S MiSeq

Dataset size is: 153.22 MiB

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Data and Resources

This data is made available openly under a Creative Commons Attribution license. Please see the initiative Data Policy for attribution information.

Additional Info Show Blank Fields

Field Value
Resource Permissions organization_member_after_embargo:date_of_transfer_to_archive:90:am-consortium-members
Access Control Date 2022-07-12
Access Control Mode date
Sequence Data Type illumina-amplicons
Related Data doi:10.25953/ep2x-jh13
am_environment Marine
ammonium (μmol/L) -9999.0
amplicon 16S
analysis_software MiSeq Reporter
analysis_software_version 2.6.2.3
analytical_platform MiSeq
base_url https://downloads-qcif.bioplatforms.com/bpa/amd/amplicons-miseq/16s/BPAOPS-1217/
bicarbonate (mg/L) -9999.0
bioplatforms_dataset_id 102.100.100/401950
bioplatforms_project Australian Microbiome Initiative (AM)
bioplatforms_project_code AM_DNP
biotic_relationship Free-living
carbonate (mg/L) -9999.0
ccg_jira_ticket BPAOPS-1217
chloride (mg/L) -9999.0
collection_date 2021-06-18T00:30:00
comments 138592_16S_KD7T7_GACTTGGT-CGATCTAC
conductivity_aqueous (S/m) -9999.0
data_type 16S
database_schema_definitions_url https://github.com/AusMicrobiome/contextualdb_doc/raw/4.2.0/db_schema_definitions/db_schema_definitions.xlsx
dataset_id 102.100.100/401950
date_of_transfer 2022-04-13
date_of_transfer_to_archive 2022-04-13
depth (m) 0.0
depth_lower (m) 0.0
depth_upper (m) 0.0
description MiSeq data package
dilution_used neat
env_broad_scale 1 Conservation and Natural Environments
env_local_scale 1.1 Nature conservation
env_medium Fresh water [ENVO_00002011]
flow_id KD7T7
folder_name 20220413_AM_16S_UNSW_KD7T7
geo_loc_name Australia
icp_te_boron (mg/L) -9999.0
icp_te_calcium (mg/L) -9999.0
icp_te_copper (mg/L) -9999.0
icp_te_iron (mg/L) -9999.0
icp_te_manganese (mg/L) -9999.0
icp_te_phosphorus (mg/L) -9999.0
icp_te_sulfur (mg/L) -9999.0
icp_te_zinc (mg/L) -9999.0
index GACTTGGT-CGATCTAC
magnesium (mg/L) -9999.0
nitrate (μmol/L) -9999.0
nucl_acid_ext meth_3.1.7
omics Genomics
pass_fail P
pcr_plate_name MAZ9687_9834_10214_10215_16S1_SetB
ph -9999.0
potassium (mg/L) -9999.0
reads 299814.0
samp_collect_device meth_1.22
samp_size (L) 1.5
samp_vol_we_dna_ext (L) 1.5
sample_attribution Jared Archibald
sample_database_file AM_db_v4.2_202402091224.db
sample_id 102.100.100/138592
sample_metadata_ingest_date 2022-08-04 11:42:25
sample_metadata_ingest_file Groot_water_merge_CSBPflagValues_xlsxUTC_convert_xlsx
sample_metadata_update_history bush_blitz_water_sampling_method_UPDATE_xlsx; AM_add_meth_for_ALL_DB_UPDATE_xlsx;
sample_site_location_description king crossing
sample_submitter Bissett
sample_type Fresh water
sequencing_facility Ramaciotti
sodium (mg/L) -9999.0
source_mat_id 102.100.100/138592
target 16S
ticket BPAOPS-1217
url https://data.bioplatforms.com//organization/australian-microbiome?q=sample_id:102.100.100/138592
utc_date_sampled 2021-06-18
utc_time_sampled 00:30:00