Additional Information

Field Value
Data last updated July 29, 2016
Metadata last updated July 29, 2016
Created July 29, 2016
Format FASTQ
License CC-BY-4.0-AU
File size2.0G
Filename13694_AD0BC2ACXX_TTAGGC_L007_R2.fastq.gz
FlowcellD0BC2ACXX
Idbc6a4e9a7570f2a9ae8a0f5bbbac7cd2
Index number3
Lane number7
Md5bc6a4e9a7570f2a9ae8a0f5bbbac7cd2
Note{ "row": 33, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13694", "official_variety": "M4", "kingdom": "Fungi", "phylum": "Ascomycota", "species": "Pyrenophora tritici-repentis", "sample_id": "PTRA", "other_id": "", "original_source_host_species": "Triticum aestivum", "collection_date": 2009.0, "collection_location": "Meckering, WA", "wheat_pathogenicity": "High", "contact_scientist": "Caroline Moffat", "sample_dna_source": "Whole organism from in vitro culture", "dna_extraction_protocol": "Phenol / choloroform", "library": "PE", "library_construction": 390.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "3459_A", "library_id": "A", "index_number": null, "index_sequence": "TTAGGC", "run_number": 140.0, "flow_cell_id": "D0BC2ACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13694_AD0BC2ACXX_TTAGGC_L007_R2.fastq.gz", "sequence_filetype": null, "md5_checksum": "bc6a4e9a7570f2a9ae8a0f5bbbac7cd2", "file_size": "2.0G", "analysis_performed": "Assembled", "genbank_project": "N/A", "locus_tag": "N/A", "genome_analysis": "", "metdata_file": "PTRA_Meck4-metadata.txt" }
On same domainTrue
Package id102.100.100.13694
Resource typewheat-pathogens
Run index number3
Run lane number7
Run number140
Run protocolIllumina TruSeq DNA Sample Preparation
Run protocol base pairs390
Run protocol library typePE
S3etag 8388608b06602e4bb28b53ce027f96ddf3ecfb1-258
SequencerIllumina HiSeq 2000
Sha2566a0f1ca495bd6bb9f8bbd024ce08c564e3534d54059043bb5c354806db435b50
Size2 GiB
Stateactive
Url typeupload
MD5 bc6a4e9a7570f2a9ae8a0f5bbbac7cd2
SHA256 6a0f1ca495bd6bb9f8bbd024ce08c564e3534d54059043bb5c354806db435b50
File size (bytes) 2164161647
S3 E-Tag (8MB multipart) b06602e4bb28b53ce027f96ddf3ecfb1-258
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size 2.0G
flowcell D0BC2ACXX
index_number 3.0
lane_number 7.0
resource_type wheat-pathogens
run_index_number 3.0
run_lane_number 7.0
run_number 140.0
run_protocol Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs 390.0
run_protocol_library_type PE
sequencer Illumina HiSeq 2000