Additional Information

Field Value
Data last updated August 2, 2016
Metadata last updated August 2, 2016
Created August 2, 2016
Format FASTQ
License CC-BY-4.0-AU
File size3.1G
Filename13693_AC0B4AACXX_CAGATC_L007_R1.fastq.gz
FlowcellC0B4AACXX
Idfade6d9f8e3bffbc7e851c07dcc77001
Index number7
Lane number7
Md5fade6d9f8e3bffbc7e851c07dcc77001
Note{ "row": 30, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13693", "official_variety": "WAC5213", "kingdom": "Fungi", "phylum": "Ascomycota", "species": "Pyrenophora tritici-repentis", "sample_id": "PTRD", "other_id": "", "original_source_host_species": "Triticum aestivum", "collection_date": 1987.0, "collection_location": "Sydney, NSW", "wheat_pathogenicity": "High", "contact_scientist": "Caroline Moffat", "sample_dna_source": "Whole organism from in vitro culture", "dna_extraction_protocol": "Phenol / choloroform", "library": "PE", "library_construction": 465.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "3459_D", "library_id": "D", "index_number": null, "index_sequence": "CAGATC", "run_number": 173.0, "flow_cell_id": "C0B4AACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13693_AC0B4AACXX_CAGATC_L007_R1.fastq.gz", "sequence_filetype": null, "md5_checksum": "fade6d9f8e3bffbc7e851c07dcc77001", "file_size": "3.1G", "analysis_performed": "Assembled", "genbank_project": "N/A", "locus_tag": "N/A", "genome_analysis": "", "metdata_file": "PTRD_5216-metadata.txt" }
On same domainTrue
Package id102.100.100.13693
Resource typewheat-pathogens
Run index number7
Run lane number7
Run number173
Run protocolIllumina TruSeq DNA Sample Preparation
Run protocol base pairs465
Run protocol library typePE
S3etag 838860831c39de1f0cd25c888b3eb1a2b6cb1a2-401
SequencerIllumina HiSeq 2000
Sha256b9e09c76f663dd2f79ff9e03756bdd9a8cdeda5da2cad186ff608044a918d670
Size3.1 GiB
Stateactive
Url typeupload
MD5 fade6d9f8e3bffbc7e851c07dcc77001
SHA256 b9e09c76f663dd2f79ff9e03756bdd9a8cdeda5da2cad186ff608044a918d670
File size (bytes) 3359114865
S3 E-Tag (8MB multipart) 31c39de1f0cd25c888b3eb1a2b6cb1a2-401
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size 3.1G
flowcell C0B4AACXX
index_number 7.0
lane_number 7.0
resource_type wheat-pathogens
run_index_number 7.0
run_lane_number 7.0
run_number 173.0
run_protocol Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs 465.0
run_protocol_library_type PE
sequencer Illumina HiSeq 2000