Additional Information

Field Value
Data last updated August 4, 2016
Metadata last updated August 4, 2016
Created August 4, 2016
Format FASTQ
License CC-BY-4.0-AU
File size9.1G
Filename13685_C12VRACXX_CAGATC_L006_R2.fastq.gz
FlowcellC12VRACXX
Id62a52798a2c7a3269de0129329d098a4
Index number7
Lane number6
Md562a52798a2c7a3269de0129329d098a4
Note{ "row": 9, "file_name": "Wheat_pathogens_genomic_metadata.xlsx", "bpa_id": "102.100.100.13685", "official_variety": "CS3069", "kingdom": "Fungi", "phylum": "Ascomycota", "species": "Fusarium equiseti", "sample_id": "CS3069", "other_id": "", "original_source_host_species": "Triticum aestivum, crown tissue", "collection_date": 37180.0, "collection_location": "Wilga Downs, QLD", "wheat_pathogenicity": "Moderate in crown rot assay", "contact_scientist": "Donald Gardiner", "sample_dna_source": "Whole organism from in vitro culture", "dna_extraction_protocol": "QIAgen", "library": "PE", "library_construction": 484.0, "library_construction_protocol": "Illumina TruSeq DNA Sample Preparation", "sequencer": "Illumina HiSeq 2000", "sample_label": "3479_1", "library_id": "CS3069", "index_number": null, "index_sequence": "CAGATC", "run_number": 271.0, "flow_cell_id": "C12VRACXX", "lane_number": null, "qc_software": null, "sequence_filename": "13685_C12VRACXX_CAGATC_L006_R2.fastq.gz", "sequence_filetype": null, "md5_checksum": "62a52798a2c7a3269de0129329d098a4", "file_size": "9.1G", "analysis_performed": "Assembled and annotated", "genbank_project": "PRJEB1736", "locus_tag": "BN850", "genome_analysis": "CS3069_wgs*", "metdata_file": "CS3069-metadata.txt" }
On same domainTrue
Package id102.100.100.13685
Position1
Resource typewheat-pathogens
Run index number7
Run lane number6
Run number271
Run protocolIllumina TruSeq DNA Sample Preparation
Run protocol base pairs484
Run protocol library typePE
S3etag 8388608ec1ea8589f06bff49fdd3bcaef3f0801-1166
SequencerIllumina HiSeq 2000
Sha256a5b4da69e58c77a15ac11e6ee48c4732b7b65391233d7d6888062c0579b4037b
Size9.1 GiB
Stateactive
Url typeupload
MD5 62a52798a2c7a3269de0129329d098a4
SHA256 a5b4da69e58c77a15ac11e6ee48c4732b7b65391233d7d6888062c0579b4037b
File size (bytes) 9780593476
S3 E-Tag (8MB multipart) ec1ea8589f06bff49fdd3bcaef3f0801-1166
S3 E-Tag (16MB multipart)
S3 E-Tag (32MB multipart)
S3 E-Tag (64MB multipart)
S3 E-Tag (128MB multipart)
S3 E-Tag Verified At
file_size 9.1G
flowcell C12VRACXX
index_number 7.0
lane_number 6.0
resource_type wheat-pathogens
run_index_number 7.0
run_lane_number 6.0
run_number 271.0
run_protocol Illumina TruSeq DNA Sample Preparation
run_protocol_base_pairs 484.0
run_protocol_library_type PE
sequencer Illumina HiSeq 2000