JSON

TSI Illumina Shortread 102.100.100/357613 H3GYVDSX2

Mastacomys fuscus,

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type illumina-shortread
analysis_software NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422
analysis_software_version
base_url https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/illumina-shortread/BPAOPS-1061/20210415_TSI_AGRF_H3GYVDSX2/
ccg_jira_ticket BPAOPS-1061
cell_postion
data_context Genome Resequencing
data_custodian Kevin C. Rowe
data_generated True
data_type Illumina FASTQ
dataset_id 102.100.100/358736
date_of_transfer 15/04/21
date_of_transfer_to_archive 15/4/2021
decimal_latitude_public
decimal_longitude_public
description NovaSeq 6000; IDT xGen Prism; Dataset ID 358736
dna_treatment
download
experimental_design
facility_sample_id
file_count
file_name
file_type fastq.gz
flow_cell_id H3GYVDSX2
flowcell_id H3GYVDSX2
flowcell_type S4-300
folder_name 20210415_TSI_AGRF_H3GYVDSX2
genus Mastacomys
insert_size_range 350.0
latitude
library_comments
library_construction_protocol IDT xGen Prism
library_id 357613
library_index_id IDT8_i7_22 & IDT8_i5_22
library_index_sequence TCGCTGTT-CAAGTCGT
library_layout PE
library_location
library_ng_ul
library_oligo_sequence
library_pcr_cycles 10.0
library_pcr_reps
library_prep_date
library_prepared_by
library_selection
library_source
library_status
library_strategy PE
library_type DNA
longitude
movie_length
n_libraries_pooled 24.0
run_format
sample_id 102.100.100/355602
sequencing_facility AGRF
sequencing_model 6000.0
sequencing_platform NovaSeq
species fuscus
specimen_id AA68536
ticket BPAOPS-1061
tissue_number AA68536_Ear
work_order