JSON

TSI Illumina Shortread 102.100.100/357566 H3VNHDSX2

Pseudomys fumeus,

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type
analysis_software NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422
analysis_software_version
base_url https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/illumina-shortread/BPAOPS-1065/20210419_TSI_AGRF_H3VNHDSX2/
ccg_jira_ticket
cell_postion
data_context Genome Resequencing
data_custodian Kevin C. Rowe
data_generated True
data_type
dataset_id 102.100.100/358734
date_of_transfer
date_of_transfer_to_archive
decimal_latitude_public
decimal_longitude_public
description
dna_treatment
download
experimental_design
facility_sample_id
file_count
file_name
file_type fastq.gz
flow_cell_id H3VNHDSX2
flowcell_id H3VNHDSX2
flowcell_type S4-300
folder_name
genus Pseudomys
insert_size_range 350.0
latitude
library_comments
library_construction_protocol IDT xGen Prism
library_id 357566
library_index_id IDT8_i7_63 & IDT8_i5_63
library_index_sequence GATGTGTG-TAGCCATG
library_layout PE
library_location
library_ng_ul
library_oligo_sequence
library_pcr_cycles 10.0
library_pcr_reps
library_prep_date
library_prepared_by
library_selection
library_source
library_status
library_strategy
library_type DNA
longitude
movie_length
n_libraries_pooled 96.0
run_format
sample_id 102.100.100/355555
sequencing_facility AGRF
sequencing_model 6000.0
sequencing_platform NovaSeq
species fumeus
specimen_id C197
ticket BPAOPS-1065
tissue_number C197_Toe Pad
work_order