JSON
TSI Genomics ddRAD 102.100.100/358729 library
Data and Resources
Additional Info
| Field | Value |
|---|---|
| Geospatial Coverage | |
| Resource Permissions | organization_member |
| analysis_software | |
| analysis_software_version | |
| archive_ingestion_date | 2021-01-29 |
| base_url | https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/ddrad/BPAOPS-1021/AGRF_TSI_HVMTKDRXX_358727_358729/ |
| bpa_dataset_id | 102.100.100/358729 |
| cell_postion | |
| contextual_data_submission_date | |
| data_context | Population Genomics |
| data_custodian | Kevin C. Rowe |
| data_generated | 2021-01-29 |
| data_type | Illumina FASTQ |
| dataset_id | 102.100.100/358729 |
| dataset_url | |
| date_of_transfer | 2021-01-29 |
| description | NovaSeq 6000 ddRAD Pseudomys oralis ddRAD (data set ID 358729) and Galaxias fontanus ddRAD (data set ID 358727) |
| dna_treatment | |
| experimental_design | PstI and MseI |
| file_name | |
| file_type | |
| flowcell_id | HVMTKDRXX |
| flowcell_type | SP 200 |
| folder_name | AGRF_TSI_HTW2NDRXX_358724 |
| genus | Pseudomys |
| insert_size_range | |
| latitude | |
| library_comments | |
| library_construction_protocol | ddRAD (based on Peterson et al 2012) |
| library_layout | Single |
| library_location | AGRF Melbourne |
| library_ng_ul | |
| library_pcr_cycles | 11.0 |
| library_pcr_reps | 7.0 |
| library_pool_index_id | |
| library_pool_index_sequence | |
| library_pool_oligo_sequence | |
| library_prep_date | 2020-12-14 |
| library_prepared_by | Jade Cooke |
| library_selection | Reduced Representation |
| library_source | Genomic |
| library_status | Data available |
| library_strategy | RAD-Seq |
| library_type | ddRAD_AGRF |
| longitude | |
| movie_length | |
| n_libraries_pooled | 3.0 |
| sample_submission_date | 2021-01-29 |
| sequencing_facility | AGRF Melbourne |
| sequencing_model | Illumina NovaSeq 6000 |
| sequencing_platform | illumina |
| species | oralis |
| ticket | BPAOPS-1021 |
| work_order | 14005 |