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TSI Genomics ddRAD 102.100.100/358724 library

Perameles bougainville ddRAD dataset not demultiplexed

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
analysis_software
analysis_software_version
archive_ingestion_date 2020-10-13
base_url https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/ddrad/BPAOPS-966/AGRF_TSI_HTW2NDRXX_358724/
bpa_dataset_id 102.100.100/358724
cell_postion
contextual_data_submission_date
data_context Population genetics
data_custodian Kate Farquharson | USYD
data_generated 2020-10-13
data_type Illumina FASTQ
dataset_id 102.100.100/358724
dataset_url
date_of_transfer 2020-10-13
description NovaSeq 6000 ddRAD Perameles bougainville ddRAD data set ID 358724
dna_treatment
experimental_design PstI and MspI
file_name
file_type
flowcell_id HTW2NDRXX
flowcell_type SP 200
folder_name AGRF_TSI_HTW2NDRXX_358724
genus Perameles
insert_size_range
latitude
library_comments
library_construction_protocol ddRAD (based on Peterson et al 2012)
library_layout Single
library_location AGRF Melbourne
library_pcr_cycles 12.0
library_pcr_reps 7.0
library_prep_date 2020-09-18
library_prepared_by Holly McLean
library_selection Reduced Representation
library_source Genomic
library_status Data available
library_strategy RAD-Seq
library_type ddRAD_AGRF
longitude
movie_length
n_libraries_pooled 3.0
sample_submission_date 2020-10-13
sequencing_facility AGRF Melbourne
sequencing_model Illumina NovaSeq 6000
sequencing_platform illumina
species bougainville
ticket BPAOPS-966
work_order 14001