JSON

TSI Genomics ddRAD 102.100.100/358724 library

Perameles bougainville ddRAD dataset not demultiplexed

Field	Value
Geospatial Coverage
Resource Permissions	organization_member
analysis_software
analysis_software_version
archive_ingestion_date	2020-10-13
base_url	https://downloads-qcif.bioplatforms.com/bpa/tsi_staging/ddrad/BPAOPS-966/AGRF_TSI_HTW2NDRXX_358724/
bpa_dataset_id	102.100.100/358724
cell_postion
contextual_data_submission_date
data_context	Population genetics
data_custodian	Kate Farquharson \| USYD
data_generated	2020-10-13
data_type	Illumina FASTQ
dataset_id	102.100.100/358724
dataset_url
date_of_transfer	2020-10-13
description	NovaSeq 6000 ddRAD Perameles bougainville ddRAD data set ID 358724
dna_treatment
experimental_design	PstI and MspI
file_name
file_type
flowcell_id	HTW2NDRXX
flowcell_type	SP 200
folder_name	AGRF_TSI_HTW2NDRXX_358724
genus	Perameles
insert_size_range
latitude
library_comments
library_construction_protocol	ddRAD (based on Peterson et al 2012)
library_layout	Single
library_location	AGRF Melbourne
library_ng_ul
library_pcr_cycles	12.0
library_pcr_reps	7.0
library_pool_index_id
library_pool_index_sequence
library_pool_oligo_sequence
library_prep_date	2020-09-18
library_prepared_by	Holly McLean
library_selection	Reduced Representation
library_source	Genomic
library_status	Data available
library_strategy	RAD-Seq
library_type	ddRAD_AGRF
longitude
movie_length
n_libraries_pooled	3.0
sample_submission_date	2020-10-13
sequencing_facility	AGRF Melbourne
sequencing_model	Illumina NovaSeq 6000
sequencing_platform	illumina
species	bougainville
ticket	BPAOPS-966
work_order	14001