JSON

Stemcell Transcriptomics 102.100.100/29679

Field	Value
Geospatial Coverage
Resource Permissions	organization_member
Sequence Data Type	transcriptomics-analysed
analysis_software_version	1.8.2
analytical_platform	Transcriptome
archive_ingestion_date	2017-03-15
bpa_dataset_id	102.100.100/52049
cell_type	Endothelial cells
contextual_data_submission_date	2016-09-02
data_generated	2017-03-15
data_type	FastQ
dataset_url	https://downloads-qcif.bioplatforms.com/bpa/stemcell/raw/transcriptome/agrf/BPAOPS-86/
date_of_transfer	2017-03-15
description	Stem Cell Transcriptome
disease_state
extract_protocol	According to Roche RNA kit/ Bioline RNA kit
facility	AGRF
folder_name	20170315_AGRF_BPA_StemCells_CALBAANXX
growth_protocol	RPMI+B27 (Invitrogen) then changed to EGM2 (Huvec lonza)
insert_size_range	200bp
labelling
library_construction_protocol	TruSeq RNA library
library_strategy	RNASeq
omics	Transcriptomics
organism_part
plate_number
replicate_group_id	#2_replicate 2
research_group	David Elliot
sample_description	BMPR2 DelKinase Clone A
sample_id	102.100.100/29679
sample_name	34. #2 post sort 19/9
sample_submission_date	2016-09-02
sequencer	HiSeq 2500
species	Homo sapiens
stem_cell_line	PSC - Mesendoderm (cardiac differentation)
stem_cell_state	Directed differentation
submitter	Elizabeth Ling
ticket	BPAOPS-86
tissue
total_samples	24
treatment_protocol	RNA extraction
well_number