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Stemcell Transcriptomics 102.100.100/24707

Stemcell Transcriptomics 102.100.100/24707

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
analysis_software_version 1.8.2
analytical_platform Transcriptome
archive_ingestion_date 2016-05-23
bpa_dataset_id 102.100.100/52047
cell_type C11 hiPSCs were genomed edited to knock in a fluorescent protein into the endogenous SOX10 locus. This line was differentiated to neural crest cells. SOX10 positive and negative cells were harvested for analysis
contextual_data_submission_date 2016-04-19
data_generated 2016-05-27
data_type Stem Cells Transcriptome
dataset_url https://downloads-qcif.bioplatforms.com/bpa/stemcell/raw/transcriptome/agrf/BRLOPS-815/
date_of_transfer 2016-05-27
description
disease_state WT
extract_protocol Total RNA extracted using Ambion PureLink kit
facility AGRF
folder_name 20160527_AGRF_BPA_StemCells_HMHNFBCXX
growth_protocol
insert_size_range 200bp
labelling
library_construction_protocol TruSeq RNA library
library_strategy
omics Transcriptomics
organism_part
plate_number 2.0
replicate_group_id 1.0
research_group Ernst Wolvetang
sample_description Total RNA eluted in H20
sample_id 102.100.100/24707
sample_name 129_7 SOX10:mMaplenegative
sample_submission_date 2016-04-19
sequencer HiSeq 2500
species Homo sapiens
stem_cell_line PSC - Neural crest
stem_cell_state Pluripotent stem cell state
submitter Anu Balachandran
ticket BRLOPS-815
tissue
total_samples
treatment_protocol
well_number