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20170228_Analysed_data_29571-29578_Stemcells_Stemformatics

20170228_Analysed_data_29571-29578_Stemcells_Stemformatics

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
analytical_plaform Transcriptome
archive_ingestion_date 2017-12-21
base_url https://downloads-qcif.bioplatforms.com/bpa/stemcell/analysed/transcriptome/stemformatics/BPAOPS-395/
cell_type C11 hiPSCs were genomed edited to knock in a fluorescent protein into the endogenous SOX10 locus. This line was differentiated to neural crest cells. SOX10 positive and negative cells were harvested for analysis
contextual_data_submission_date
data_generated 2017-12-21
data_set small RNA and total transcriptome
data_type txt (abundance measures) and xlsx files
dataset_url https://downloads-qcif.bioplatforms.com/bpa/stemcell/analysed/transcriptome/stemformatics/BPAOPS-395/
date 2016-09-21
date_of_transfer 2017-11-17
description BPA Stem Cells Small RNA Wolvetang
disease_state WT
extract_protocol Total RNA extracted using qiagen miRNeasy mini kit
facility AGRF
facility_code stemformatics
folder_name 20170228_Analysed_data_29571-29578_Stemcells_Stemformatics
growth_protocol
labelling
library_construction_protocol TruSeq RNA library
library_strategy
molecule
omics transcriptomics
organism_part human induced pluripotent stem cells differentiated to neural crest cells in vitro
sample_description Total RNA eluted in H2O
sample_ids 102.100.100/29571, 102.100.100/29572, 102.100.100/29573, 102.100.100/29574, 102.100.100/29575, 102.100.100/29576, 102.100.100/29577, 102.100.100/29578
sample_submission_date 2017-11-17
species H.sapiens
ticket BPAOPS-395
tissue
treatment_protocol