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OMG Transcriptomics NextSeq 102.100.100/53817 H775FAFX2

Sminthopsis crassicaudata, Fr11 | Fr39 | Fy15 | Fy34 | 19-Victor | 23-Barry

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
archive_ingestion_date 2020-05-25
base_url https://downloads-qcif.bioplatforms.com/bpa/omg_staging/transcriptomics_nextseq/BPAOPS-901/
bpa_dataset_id 102.100.100/52598
bpa_library_id 102.100.100/53817
bpa_sample_id 41087 | 41088 | 41089 | 41090 | 41091 | 41092 | 41093 | 41094 | 41095 | 41096 | 41097 | 41098 | 41099 | 41100
bpa_work_order 40060.0
contextual_data_submission_date
data_custodian Andrew Pask | Stephen Frankenberg
data_generated 2020-05-25
data_type Illumina FASTQ
dataset_url https://data.bioplatforms.com/dataset/bpa-omg-transcriptomics-nextseq-102_100_100_53817-h775fafx2
date_of_transfer 2020-05-21
description OMG_52598_dunnart_RNA_library
dna_treatment NA
experimental_design mixed tissue total RNA consisted of 14 x 0.05 µg of RNA from each adult tissue plus 0.31 µg of pouch young RNA plus 0.04 µg of conceptus RNA (total 0.95 µg)
facility_sample_id FRA8129A1
flowcell_id H775FAFX2
folder_name 20200519_UNSW_BPA_OMG_H775FAFX2
genus Sminthopsis
latitude
library_comments
library_index_id TruSeq index 13
library_index_sequence TTGACT
library_location UNSW_Ramaciotti Centre for Genomics
library_ng_ul 12.7
library_oligo_sequence NA
library_pcr_cycles NA
library_pcr_reps NA
library_prep_date 2017-10-30
library_prep_method TruSeq RNA
library_prepared_by Stephen Frankenberg
library_status Data available
library_type TruSeq RNA
longitude
n_libraries_pooled 1.0
omg_project Whole genomes
sample_submission_date 2020-05-21
sequence_length Pair end 2x75bp
sequencing_facility UNSW_Ramaciotti Centre for Genomics
sequencing_platform NextSeq500
software_version GenerateFASTQ: 1.1.0.64
species crassicaudata
ticket BPAOPS-901
tissue_number Fr11 | Fr39 | Fy15 | Fy34 | 19-Victor | 23-Barry
voucher_number no voucher
voucher_or_tissue_number Fr11 | Fr39 | Fy15 | Fy34 | 19-Victor | 23-Barry