OMG Genomics ddRAD 102.100.100/52641 library

Isoodon ddRAD dataset not demultiplexed

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type illumina-ddrad
archive_ingestion_date 2020-10-08
base_url https://downloads-qcif.bioplatforms.com/bpa/omg_staging/ddrad/BPAOPS-962/AGRF_OMG_HV2LKDRXX_52641/
bpa_dataset_id 102.100.100/52641
bpa_work_order 40062
contextual_data_submission_date
data_custodian Kym Ottewell
data_generated 2020-10-08
data_type Illumina FASTQ
dataset_url
date_of_transfer 2020-10-08
description NovaSeq 6000 ddRAD Isoodon auratus ddRAD data set ID 52641
dna_treatment
experimental_design PstI and MspI
flowcell_id HV2LKDRXX
folder_name AGRF_OMG_HV2LKDRXX_52641
genus Isoodon
latitude
library_comments
library_location AGRF Melbourne
library_pcr_cycles 11.0
library_pcr_reps 7.0
library_pool_index_id
library_pool_index_sequence
library_pool_oligo_sequence
library_prep_date 2020-09-11
library_prep_method ddRAD (based on Peterson et al 2012)
library_prepared_by Holly McLean
library_status Data available
library_type ddRAD_AGRF
longitude
n_libraries_pooled 5
omg_project Conservation genomics
plate_name
sample_submission_date 2020-10-08
sequence_length 150 PE
sequencing_facility AGRF Melbourne
sequencing_platform illumina NovaSeq 6000
software_version
species
ticket BPAOPS-962
tissue_number
voucher_id no voucher
voucher_number
voucher_or_tissue_number