
GAP ONT MinION, Reference genome, 79638,
Data and Resources
Additional Info
Field | Value |
---|---|
Geospatial Coverage | |
Resource Permissions | organization_member |
bait_set_name | |
bait_set_reference | Not applicable |
base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/ont-minion/BPAOPS-847/ |
ccg_jira_ticket | BPAOPS-847 |
cell_postion | MN17324 |
data_generated | True |
data_type | Pilot |
dataset_id | 102.100.100/83642 |
date_of_transfer | 22/08/2019 |
date_of_transfer_to_archive | 23/08/2019 |
description | MinION |
dna_extract | No |
dna_extract_pressed_sheet | No |
download | https://data.bioplatforms.com/dataset/bpa-gap-ont-minion-79638 |
facility | AGRF |
family | Fabaceae |
file_count | |
flow_cell_type | MinION (R9.4.1) |
folder_name | 20190822_GAP_AGRF_FAK90583 |
genomic_material_associated_references | Acacia DNA extraction protocol on GAP website |
genomic_material_preparation_date | 2019-07-03 |
genomic_material_preparation_materials | STE:CTAB/chloroform; isopropanol :NaAC precipitation |
genomic_material_preparation_process | STE:CTAB/chloroform; isopropanol :NaAC precipitation |
genomic_material_preparation_type | gDNA |
genomic_material_prepared_by | Todd McLay |
herbarium_code | CANB |
id_vetting_by | |
id_vetting_date | |
insert_size_range | >15 Kb |
library_construction_protocol | Ligation Sequencing Kit (SQK-LSK109) |
library_id | 81645 |
living_collections_catalog_number | CANB 748486 |
living_collections_event_date | 2019-05-01 |
living_collections_material_sample_rna | Not applicable |
living_collections_record_number | TM304 |
living_collections_recorded_by | Todd McLay |
nagoya_protocol_compliance | Yes |
nagoya_protocol_permit_number | DNP Reference 2018/19-8 |
nanopore_software_version | MinKNOW: 19.06.8, Guppy: 3.0.4 |
preservation_date_begin | 2019-07-03 |
preservation_temperature | ambient |
preservation_type | Silica, frozen |
project_aim | Reference genome |
run_id | FAK90583 |
sample_id | 102.100.100/79638 |
sample_submission_date | 2019-05-17 |
sample_submitter_email | Daniel.Murphy@rbg.vic.gov.au |
sample_submitter_name | Daniel Murphy | Acacia Genome Consortium |
scientific_name | Acacia pycnantha |
scientific_name_authorship | Benth. |
scientific_name_notes | |
sequencer | ONT MinION |
silica_gel | No |
silica_gel_id | Not applicable |
silica_gel_pressed_sheet | No |
ticket | BPAOPS-847 |
voucher_herbarium_catalog_number | CANB 748486 |
voucher_herbarium_collector_id | S.R. Donaldson |
voucher_herbarium_event_date | 2007-10-12 |
voucher_herbarium_record_number | S.R. Donaldson 3550 |
voucher_herbarium_recorded_by | S.R. Donaldson |