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GAP Illumina short read, Phylogenomics, 81218, Angiosperms353 bait kit

Meistera dallachyi (F.Muell.) Skornick. & M.F.Newman, Zingiberaceae, Darren Crayn

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
Sequence Data Type
analysissoftwareversion NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422
bait_set_name Angiosperms353 bait kit
bait_set_reference 10.1093/sysbio/syy086
base_url https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-1034/20210215_GAP_AGRF_CAGRF21025252_HWHHHDSXY/
ccg_jira_ticket BPAOPS-1034
country
data_generated True
data_type Main dataset
dataset_id 83658
date_data_published
date_of_transfer 17/02/2021
date_of_transfer_to_archive 5/3/2021
description Illumina Short Read
dna_extract No - Plant Material sent to AGRF for DNA extraction
dna_extract_pressed_sheet
download
facility AGRF
family Zingiberaceae
flow_cell_id HWHHHDSXY
folder_name 20210215_GAP_ AGRF_CAGRF21025252_HWHHHDSXY
genomic_material_associated_references
genomic_material_preparation_date
genomic_material_preparation_materials
genomic_material_preparation_process Qiagen DNeasy 96 Plant Kit
genomic_material_preparation_type gDNA
genomic_material_prepared_by AGRF (Oct 2020)
herbarium_code CNS
id_vetting_by Worboys, S.J.
id_vetting_date 2020-07-16
library_construction_protocol NEBNext Ultra II DNA with MyBaits Angio353 Capture
library_id 83424
living_collections_catalog_number
living_collections_event_date
living_collections_material_sample_rna
living_collections_record_number
living_collections_recorded_by
location_id
location_notes
nagoya_protocol_compliance pre nagoya
nagoya_protocol_permit_number
population_group
preservation_date_begin
preservation_temperature
preservation_type
project_aim Phylogenomics
run_format 150PE
sample_id 102.100.100/81218
sample_submission_date 2020-09-28
sample_submitter_email darren.crayn@jcu.edu.au
sample_submitter_name Darren Crayn
scientific_name Meistera dallachyi
scientific_name_authorship (F.Muell.) Skornick. & M.F.Newman
scientific_name_notes
sequencer NovaSeq 6000
silica_gel Yes
silica_gel_id Dowe, J.L. 1311
silica_gel_pressed_sheet Yes
species_complex
state_or_territory
ticket BPAOPS-1034
voucher_herbarium_catalog_number 138888
voucher_herbarium_collector_id Dowe, J.L.
voucher_herbarium_event_date 2013-01-11
voucher_herbarium_record_number 1311
voucher_herbarium_recorded_by