
GAP Illumina short read, Phylogenomics, 80876, Angiosperms-353 bait kit
Data and Resources
Additional Info
Field | Value |
---|---|
Geospatial Coverage | |
Resource Permissions | organization_member |
analysissoftwareversion | NovaSeq Control Software (NCS) v1.7.0 and Real Time Analysis (RTA) v3.4.4, bcl2fastq 2.20.0.422 |
bait_set_name | Angiosperms-353 bait kit |
bait_set_reference | 10.1093/sysbio/syy086 |
base_url | https://downloads-qcif.bioplatforms.com/bpa/plants_staging/genomics-illumina-shortread/BPAOPS-984/20201116_GAP_AGRF_CAGRF20083582_HVM7GDRXX/ |
ccg_jira_ticket | BPAOPS-984 |
data_generated | True |
data_type | Main dataset |
dataset_id | 102.100.100/83653 |
date_of_transfer | 18/11/20 |
date_of_transfer_to_archive | 19/11/2020 |
description | Illumina Short Read |
dna_extract | No - Plant Material sent to AGRF for DNA extraction |
dna_extract_pressed_sheet | |
download | |
facility | AGRF |
family | Plantaginaceae |
file_count | |
flow_cell_id | HVM7GDRXX |
folder_name | 20201116_GAP_AGRF_CAGRF20083582_HVM7GDRXX |
genomic_material_associated_references | |
genomic_material_preparation_date | |
genomic_material_preparation_materials | |
genomic_material_preparation_process | Qiagen DNeasy 96 Plant Kit |
genomic_material_preparation_type | gDNA |
genomic_material_prepared_by | AGRF (Aug-Sep 2020) |
herbarium_code | AD |
id_vetting_by | |
id_vetting_date | 2000-01-01 |
library_construction_protocol | NEBNext Ultra II DNA with MyBaits Angio353 Capture |
library_id | 83067 |
living_collections_catalog_number | |
living_collections_event_date | |
living_collections_material_sample_rna | |
living_collections_record_number | |
living_collections_recorded_by | |
nagoya_protocol_compliance | pre nagoya |
nagoya_protocol_permit_number | N/A |
preservation_date_begin | |
preservation_temperature | |
preservation_type | |
project_aim | Phylogenomics |
run_format | 100PE |
sample_id | 102.100.100/80876 |
sample_submission_date | 2020-08-27 |
sample_submitter_email | michelle.waycott@sa.gov.au |
sample_submitter_name | Michelle Waycott |
scientific_name | Veronica decorosa |
scientific_name_authorship | F.Muell. |
scientific_name_notes | |
sequencer | NovaSeq 6000 |
silica_gel | No |
silica_gel_id | |
silica_gel_pressed_sheet | |
ticket | BPAOPS-984 |
voucher_herbarium_catalog_number | AD133892 |
voucher_herbarium_collector_id | W.R. Telfer | C. Oats |
voucher_herbarium_event_date | 1999-11-24 |
voucher_herbarium_record_number | BS104-4840 |
voucher_herbarium_recorded_by | W.R. Telfer | C. Oats |