JSON

AusARG ONT PromethION 102.100.100/349777 PAF09309

102.100.100/350786 Pogona vitticeps, None

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
access_rights
ala_species_name
ala_specimen_url
analysis_software MinKNOW 20.06.9, MinKNOW Core 4.0.3, Bream 6.0.7, Guppy 4.0.11
analysis_software_version MinKNOW 20.06.9, MinKNOW Core 4.0.3, Bream 6.0.7, Guppy 4.0.11
ancillary_notes
archive_ingestion_date 2021-03-29
associated_media
barcode_id
base_url https://downloads-qcif.bioplatforms.com/bpa/ausarg_staging/promethion/BPAOPS-1056/20210324_AusARG_RamaciottiGarvan_PAF09309/
birth_date
cell_position
cell_postion 3F
certainty
class
collection_date
collection_method
collector
collector_sample_id
common_name
contextual_data_submission_date
coord_uncertainty_metres
country
data_context Reference Genome
data_custodian Arthur Georges
data_generated 2021-03-29
data_type ONT-promethion
dataset_id 102.100.100/351764
dataset_url
date_of_transfer 2021-03-24
death_date
description PromethION
dna_treatment
experimental_design ONT PromethION
facility_project_code Pogona_ONT
facility_sample_id PLPN165068
family
file
flowcell_id PAF09309
flowcell_type PromethION (R9.4)
folder_name 20210324_AusARG_RamaciottiGarvan_PAF09309
genotypic_sex
genus Pogona
habitat
identified_by
insert_size_range
institution_name
latitude
library_comments
library_construction_protocol SQK-LSK109
library_id 102.100.100/350786
library_index_id
library_index_sequence
library_location BPA
library_ng_ul
library_oligo_sequence
library_pcr_cycles
library_pcr_reps
library_prep_date 2020-08-25
library_prepared_by Jill H.
library_status genomic DNA
library_type Ligation
lifestage
location_generalisation
location_text
longitude
material_conc_ng_ul
material_extracted_by
material_extraction_date
material_extraction_method
material_extraction_type
method_of_determination
movie_length
n_libraries_pooled
order
phenotypic_sex
phylum
prior_genetics
sample_custodian
sample_id 102.100.100/349777
sample_quality
sample_submission_date 2021-03-24
sequence_length
sequencing_facility Ramaciotti/Garvan
sequencing_platform ONT PromethION
source_population
species vitticeps
species_name
specimen_id
specimen_id_description
state_or_region
subspecies
taxon_id
taxonomic_group
ticket BPAOPS-1056
tissue_collection
tissue_number
tissue_preservation
tissue_type
type_status
voucher_id
voucher_number
voucher_or_tissue_number
wild_captive
work_order NA