JSON

AusARG ONT PromethION 102.100.100/349747 PAG07318

102.100.100/350766 Bassiana duperreyi,

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
access_rights
ala_species_name
ala_specimen_url
analysis_software MinKNOW 20.06.18, MinKNOW Core 4.0.5, Bream 6.0.10, Guppy 4.0.11
analysis_software_version MinKNOW 20.06.18, MinKNOW Core 4.0.5, Bream 6.0.10, Guppy 4.0.11
ancillary_notes
archive_ingestion_date 2021-03-04
associated_media
barcode_id
base_url https://downloads-qcif.bioplatforms.com/bpa/ausarg_staging/promethion/BPAOPS-1040/20210209_AusARG_RamaciottiGarvan_PAG07318/
birth_date
cell_position
cell_postion 2C
certainty
class Reptilia
collection_date
collection_method
collector
collector_sample_id
common_name Eastern Three-lined Skink
contextual_data_submission_date
coord_uncertainty_metres
country
data_context Reference Genome
data_custodian Arthur Georges
data_generated 2021-03-04
data_type ONT-promethion
dataset_id 102.100.100/351747
dataset_url
date_of_transfer 2021-02-15
death_date
description PromethION
dna_treatment
experimental_design ONT PromethION
facility_project_code Q0004734
facility_sample_id PLPN265151
family Scincidae
file
flowcell_id PAG07318
flowcell_type PromethION (R9.4)
folder_name 20210209_AusARG_RamaciottiGarvan_PAG07318
genotypic_sex
genus Bassiana
habitat
identified_by
insert_size_range >60
institution_name
latitude
library_comments genomic DNA
library_construction_protocol LSK109
library_id 102.100.100/350766
library_index_id
library_index_sequence
library_location BPA
library_ng_ul 350.0
library_oligo_sequence
library_pcr_cycles 0.0
library_pcr_reps 0.0
library_prep_date 2020-11-16
library_prepared_by Igor S.
library_status Data available
library_type Ligation
lifestage
location_generalisation
location_text
longitude
material_conc_ng_ul
material_extracted_by
material_extraction_date
material_extraction_method
material_extraction_type
method_of_determination
movie_length
n_libraries_pooled 1
order Squamata
phenotypic_sex
phylum Chordata
prior_genetics
sample_custodian
sample_id 102.100.100/349747
sample_quality
sample_submission_date 2021-02-15
sequence_length
sequencing_facility Ramaciotti/Garvan
sequencing_platform ONT PromethION
source_population
species duperreyi
species_name
specimen_id
specimen_id_description
state_or_region
subspecies
taxon_id
taxonomic_group
ticket BPAOPS-1040
tissue_collection
tissue_number
tissue_preservation
tissue_type
type_status
voucher_id
voucher_number
voucher_or_tissue_number
wild_captive
work_order 13010.0