JSON

ARP Transcriptomics Hiseq 51504

ARP Transcriptomics Hiseq Raw Data: Klebsiella variicola 03-311-0071 Pooled sera Replicate 2

Field	Value
Geospatial Coverage
Resource Permissions	organization_member
Sequence Data Type	illumina-transcriptomics
additional_notes
analytical_platform	HiSeq
archive_ingestion_date
archive_ingestion_dates	13/11/2018
barcode_tag	AGTACTCC-AACCTGTT
casava_version	bcl2fastq v2.20.0.422
concentration_ng_per_ul
contact_researcher	Dick Strugnell
contextual_data_submission_date	2018-08-17
culture_collection_date
culture_collection_id
data_generated	True
data_type	Main dataset
either_260_280
facility	AGRF
flow_cell_ids	CD2ANANXX
gram_stain	NEG
growth_condition_growth_phase	N/A
growth_condition_media	Pooled sera
growth_condition_od600_reading	N/A
growth_condition_temperature	37.0
growth_condition_time_(h)	2 hrs exposure to sera
growth_media	Pooled sera
host_age
host_description
host_disease_outcome
host_dob
host_location
host_sex
isolation_source
key_virulence_genes
library_construction_protocol	Truseq Stranded mRNA
omics	Transcriptomics
publication_reference
quantification_method
replicate	2
sample	51515
sample_id	102.100.100/51504
sample_submission_date	2018-07-27
sample_type	RNA
sequencer	HiSeq 2500
serovar
strain_description
strain_or_isolate	03-311-0071
taxon_or_organism	Klebsiella variicola
ticket	BPAOPS-742
volume_ul
work_order