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ARP Transcriptomics Hiseq 51498

ARP Transcriptomics Hiseq Raw Data: Klebsiella variicola 03-311-0071 RPMI Replicate 2

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
additional_notes
analytical_platform HiSeq
archive_ingestion_date
archive_ingestion_dates 13/11/2018
barcode_tag AGTACTCC-AACCTGTT
casava_version bcl2fastq v2.20.0.422
concentration_ng_per_ul
contact_researcher Dick Strugnell
contextual_data_submission_date 2018-08-17
culture_collection_date
culture_collection_id
data_generated True
data_type Main dataset
either_260_280
facility AGRF
flow_cell_ids CD2ANANXX
gram_stain NEG
growth_condition_growth_phase Mid log phase
growth_condition_media RPMI
growth_condition_od600_reading 4.83
growth_condition_temperature
growth_condition_time_(h) 1 hr
growth_media RPMI
host_age
host_description
host_disease_outcome
host_dob
host_location
host_sex
isolation_source
key_virulence_genes
library_construction_protocol Truseq Stranded mRNA
omics Transcriptomics
publication_reference
quantification_method
replicate
sample 51515
sample_id 102.100.100/51498
sample_submission_date 2018-07-27
sample_type RNA
sequencer HiSeq 2500
serovar
strain_description
strain_or_isolate 03-311-0071
taxon_or_organism Klebsiella variicola
ticket BPAOPS-742
volume_ul
work_order