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ARP Transcriptomics Hiseq 51484

ARP Transcriptomics Hiseq Raw Data: Klebsiella variicola AJ292 Pooled sera Replicate 6

Data and Resources

Additional Info

Field Value
Geospatial Coverage
Resource Permissions organization_member
additional_notes
analytical_platform HiSeq
archive_ingestion_date
archive_ingestion_dates 13/11/2018
barcode_tag AGTACTCC-AACCTGTT
casava_version bcl2fastq v2.20.0.422
concentration_ng_per_ul
contact_researcher Dick Strugnell
contextual_data_submission_date 2018-08-17
culture_collection_date 2002-10-23
culture_collection_id
data_generated True
data_type Main dataset
either_260_280
facility AGRF
flow_cell_ids CD2ANANXX
gram_stain NEG
growth_condition_growth_phase N/A
growth_condition_media Pooled sera
growth_condition_od600_reading N/A
growth_condition_temperature
growth_condition_time_(h) 2 hrs exposure to sera
growth_media Pooled sera
host_age 66
host_description
host_disease_outcome Sepsis
host_dob
host_location Victoria, Australia (Alfred Hospital, Melbourne)
host_sex F
isolation_source Blood
key_virulence_genes
library_construction_protocol Truseq Stranded mRNA
omics Transcriptomics
publication_reference
quantification_method
replicate
sample 51515
sample_id 102.100.100/51484
sample_submission_date 2018-08-08
sample_type RNA
sequencer HiSeq 2500
serovar K61
strain_description
strain_or_isolate AJ292
taxon_or_organism Klebsiella variicola
ticket BPAOPS-742
volume_ul
work_order